Acetobacter sp. JWB: DS739_11845
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Entry
DS739_11845 CDS
T05544
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acet
Acetobacter sp. JWB
Pathway
acet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DS739_11845 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acet03019
]
DS739_11845 (pnp)
03016 Transfer RNA biogenesis [BR:
acet03016
]
DS739_11845 (pnp)
Enzymes [BR:
acet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DS739_11845 (pnp)
Messenger RNA biogenesis [BR:
acet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DS739_11845 (pnp)
Transfer RNA biogenesis [BR:
acet03016
]
Prokaryotic type
tRNA degradation factors
DS739_11845 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
CCDC47
Motif
Other DBs
NCBI-ProteinID:
AXC27363
LinkDB
All DBs
Position
complement(2499925..2502075)
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AA seq
716 aa
AA seq
DB search
MFNYFRKEIEWGGRPLILETGKVARQADGAVMVTYGETVVLCTAVGAKEVKPGQDFFPLT
VNYQEKAYAAGKIPGGFFKREGRPSENETLVSRLIDRPLRPLFPEGFRNEVQVIATVLTH
DMENDPSIPALIGCSAALTLSGIPFFGPVGAARVGFKDGAFILNPTQEQIKESDLELVVA
GTAEGVLMVESEASELSEEVMLDAVTFGHTAFQPVLDAIISLAEHAAKEPWALAEPTKEE
IQLRKQVEKAGRKLIADAYKEKQKQVRYEKLKAARAAIVEKLTADELDVAAAKPMIKDLE
ADVVRSSVLKTGKRIDGRDLVTVRPIVPEVGILPRVHGSSLFTRGETQALVVTTLGTGQD
EQVIDALEGEYRTNFMLHYNFPPFSVGECGRIGSPGRREIGHGKLAWRAIHPLMPSRKEF
PYTVRVVSEITESNGSSSMATVCGGSLALMDAGVPLKRPVAGIAMGLIKEGDDFAVLSDI
LGDEDHLGDMDFKVAGTEQGVTALQMDIKITSITPEIMKIALGQARDGRMHILGEMSKAL
TETRTNVSSTAPKITTMKVPREKIRDVIGSGGKVIREIVEYSGAKVDIGDDGTITIAAAS
DDQAQKAIDRINGIVAEPELGRIYDGKVVKTADFGAFVNFLGARDGLVHISELAQGRVGK
TTDVVKEGDTVKVKVIGFDDRGKVKLSMRVVDQNTGADITETVGEKPSRGPRRDAE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactacttccgtaaagaaattgaatggggcggtcgcccgctgattctggaaact
ggcaaagttgcccgtcaggctgatggcgccgtgatggtcacttacggtgaaaccgttgtg
ctgtgcaccgctgttggtgcaaaagaggtaaagcccggtcaggactttttcccgctgaca
gttaattatcaggaaaaagcttacgctgcaggtaagattcccggtggtttctttaagcgt
gaaggccgtccttctgaaaatgaaacactggtttcccgcctgattgaccgcccgctgcgt
ccgctgttccctgaagggttccgcaacgaagtgcaggtaattgcaactgtgctgacgcac
gatatggaaaatgatccttccattcctgcgctgatcggctgttctgccgctctgactttg
tctggtatcccattctttggccccgttggcgcagcccgcgttggctttaaggatggcgca
ttcatcctgaacccgacacaggaacagatcaaagaatcagatctggaactggttgtggct
ggcacggcagaaggcgtgctgatggtggaatccgaagcttccgaactgtctgaagaagtg
atgctggatgccgtaacgttcggccatacagcattccagcctgttctggatgccattatc
tccttggcagagcacgcagccaaggaaccatgggcactggcagagcccaccaaggaagaa
attcagctgcgcaagcaggtggaaaaagctggtcgcaagctgattgctgatgcttacaag
gagaagcagaagcaggtgcgctacgaaaagctgaaagcagcacgtgcagccattgttgaa
aaactgactgctgatgaactggacgttgcagccgccaagccgatgatcaaggatctggaa
gctgatgttgtgcgctcttccgttctgaaaaccggcaagcgtattgatggtcgtgatctg
gtaactgtccgtccgatcgtgccggaagttggtattctgccgcgcgtacatggctcttct
ctgttcactcgtggtgaaacgcaggcgctggttgtgaccacgctgggtacagggcaggac
gaacaggttattgatgcgctggaaggtgaataccgcaccaactttatgctgcattataac
ttcccacccttctctgtgggggaatgtgggcgtatcggttctccgggccgtcgtgaaatc
gggcatggcaagctggcatggcgcgctattcacccgctgatgccttcccgcaaggaattc
ccatacacagtgcgcgtggtttccgaaattacggaaagcaatgggtcttcttccatggca
actgtatgcggtggctctctagctctgatggatgctggtgtgccattgaagcgtccggtt
gctggcattgctatgggtctgatcaaggaaggcgatgatttcgctgttctgtctgatatt
cttggcgatgaagatcatcttggggatatggacttcaaggtggctggcaccgaacagggt
gtgacagccctacagatggatattaagattacttccatcacgccggaaatcatgaagatt
gctttggggcaggctcgtgatggccggatgcatattctgggtgaaatgagcaaggcgctg
acagaaacacgcaccaacgtgtcttccacagcaccgaagatcaccaccatgaaggtgcct
cgggaaaagatccgtgatgtgatcggctctggcggtaaagtgatccgcgaaatcgtggaa
tattctggcgccaaggttgatattggggatgacggcacaatcaccattgccgccgcttct
gatgatcaggcacagaaggctattgaccggatcaatggcattgtggcggaaccggaactg
ggccgcatttacgatggtaaggttgttaaaactgccgattttggtgcgtttgtaaacttc
cttggtgcacgtgatggcttagtacacatttccgaactggcgcagggccgcgttggtaaa
accacggatgtggtgaaggaaggcgataccgtgaaggttaaggtcatcggctttgatgat
cgcggcaaggttaagctgtccatgcgtgttgttgatcagaacacgggtgcggatatcacg
gaaactgtgggtgaaaagccctcacgtggcccccgtcgggatgctgaataa
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