Acetobacter sp. JWB: DS739_11855
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Entry
DS739_11855 CDS
T05544
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
acet
Acetobacter sp. JWB
Brite
KEGG Orthology (KO) [BR:
acet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acet03016
]
DS739_11855
Enzymes [BR:
acet01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DS739_11855
Transfer RNA biogenesis [BR:
acet03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DS739_11855
Prokaryotic type
DS739_11855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AXC27782
LinkDB
All DBs
Position
complement(2502654..2503571)
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AA seq
305 aa
AA seq
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MRRRRGRPLNGWLIVDKPSGMTSTQVVGRAKRLFDAQKVGHGGTLDPLATGLLPLAFGAA
TKTVPYVMDGTKVYRFTLKMGEARDSDDADGNVIGTSDVRPSDEELRAALPALTGDIMQV
PPVFSALKVGGERSYDMAREGRPPELPPRPARVDRFELIERPDRDTAVFEVESGKGVYMR
ALARDVALACGTVGHITVLRRLRVGPFTEADAIVLDKITPNDDNAHASPELLRPVSTALA
DIPALALTQDEAVLLRHGQALGLVDLMGRIPQTAEEGGVVRVMDGEHVLGIGRLEDGWLK
PVRIL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcagacgtgggcggccacttaatggctggcttatagtagacaagccttccggc
atgacatcaacacaggtagtagggcgcgccaaacggctgtttgatgcacaaaaagttggg
catggcggcacactcgatccactggcgacgggtttgctgccactggcttttggtgccgct
acaaaaaccgtgccttacgtgatggatggaaccaaggtgtaccgcttcactcttaaaatg
ggtgaagcgcgagatagcgatgatgccgatggcaatgttattggtacatctgatgtgcgg
ccttctgatgaagaactgcgagcagccttacccgcgcttacgggtgatatcatgcaggta
cctcctgttttttctgctttgaaagtggggggagagcgttcttacgatatggcgcgagaa
ggtcgtccgccggaattgccgccgcggcccgcacgcgtagatcggtttgaactgatcgag
cggccagatcgggatacagcagtgtttgaagtcgaatccggcaagggcgtttatatgcgt
gcgctggcgcgtgatgtggctttggcatgcggaacagtgggacatattaccgtgctgcgc
cgcctgcgtgtggggccttttacagaagccgatgcgattgtgctggacaaaatcacccca
aacgacgacaacgcccatgcttcaccggaacttctgcgtccggtctcgaccgcgctggcc
gacatcccggcgctggccttgacacaggatgaagcggttctgctacggcacgggcaagct
ctcggccttgttgatctgatggggcgtatcccacagaccgccgaggaggggggcgttgtg
cgtgttatggacggtgagcacgtgctgggtattggccgcctggaagacgggtggttgaag
ccggtacggattctctaa
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