Acetobacter sp. JWB: DS739_12670
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Entry
DS739_12670 CDS
T05544
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
acet
Acetobacter sp. JWB
Brite
KEGG Orthology (KO) [BR:
acet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acet03400
]
DS739_12670 (addB)
Enzymes [BR:
acet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DS739_12670 (addB)
DNA repair and recombination proteins [BR:
acet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DS739_12670 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AXC27508
LinkDB
All DBs
Position
complement(2682307..2685396)
Genome browser
AA seq
1029 aa
AA seq
DB search
MKLATIPAHLPFLDQLAIRWIESANHDVEAIGEGIIVLPGRRAARALTEAFLRHMDGQSV
LLPRIVPIGALDEAELGLSAGIGGELALDLPPAVASMTRLAVLARLVLQADKAFGTRPTL
DQAWPLAKALADLMDEAEWSGVNLAERLPEAVQENFAEHWQIILRFLEIVTQAWPEWLRE
NGVMNPVARQVALLEAQADLWRKLAQQGDSTPIWAAGFTHVMQPTVKVLQAVLECPAGKV
VLPGLDMMMAEETFLSLPDSHPQAGLSALLKNLEITRNKVQIWEGTGKGAGRAAILARVL
LPAEALDDWSHPGGAELENVYRLDAADQQEEAVAISMIMREAIEKPMHRVALVTPDRVLA
ARVATELARWGVLADDSAGSSLVDTPAAVLLRLVAQMVDSRFSPVSLLSVLKHPLVACGF
SSGVCRATARLLERAILRGPAPPPGFAALCRVVNNALENLNERAKAKLEGGITADRPFGP
VALSVFMQRLAFCLEPVLGWELDAVEASVQTAQDLEQHCAPVPDLLAALIATVERLVATD
EESASERLWRGEEGNMLASQLTELMLASEVLPPQPPVVLDGLLTAVLAPERVAMRRGGDP
KSLHPRVLIWGLFESRLQTAETVILGGLSEGVWPPVVDAGPWMSRPMRQRMGLPSPEQAV
GQAAHDFFASAAAADTVILSSARRREGAPVVPARWLTRLDAFLAGRNGYIPNHPALVWLN
KLDQPLGPATPVAPPQPMPPVALRPRRLSVTEIETWIRDPYAIYAKHILRLEVLPELEEA
ADASDYGMIVHKALERWVKAYAVAWPENAEKKLCDLFSASLQEHVLRPALRAWWAPRLTR
IARWVVQAEEKRRSEHGVPRAILTEIRGRVSIMDAPGGKFDIVGRADRIELNADGHVIVQ
DYKTGTLPSAKDVWAGWSPQLPLEAAMIIRGGFKEVPEHSREISDLIYWRLTGGADPGEE
VVVKTREALSLTDLAEQTWENLLLRVAAYDQPDQPYLSHPHPGREPRFADYARLARVPEW
NSARKEDEE
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgcaacaattcccgcacaccttcctttccttgatcaactcgccatacgttgg
atcgaatctgcaaatcatgatgtagaagctataggtgaaggcattattgtattgcccggc
agacgtgctgcacgtgcattaacagaagcttttttgcgccatatggatgggcagagtgta
ttgctgccacgcattgtgcctatcggtgcgctggatgaagctgaactgggattgtccgct
ggcataggcggtgaactggcattggacttgcccccggctgttgccagtatgacaaggtta
gctgtattggcgcggctggttttgcaggcagataaagcatttggcacacggccaacactg
gatcaggcatggcctttggcaaaagctctggcagatttaatggatgaagccgagtggtct
ggcgttaatctggcagaacgtttgccagaagctgtgcaagaaaactttgcagaacattgg
caaattattttaagatttctagaaattgtaacacaggcatggccagagtggctaagggaa
aacggggttatgaaccctgtggccagacaggttgcgttgcttgaagcacaggcggattta
tggcgtaaactcgcgcaacagggtgatagtacacctatatgggcggccgggtttacacat
gttatgcagcctacagtaaaggtgttgcaagccgttctggaatgtcctgcaggtaaggtt
gtattgccaggattggatatgatgatggcagaggaaacctttctttctttgccagatagt
cacccccaagctgggttaagtgctttactaaaaaatttagaaatcacacgaaataaagtt
caaatttgggaaggcacaggaaaaggagcaggacgagctgccattcttgcgcgcgttctt
cttccggctgaagctttggatgattggtctcatccgggtggtgctgagttagaaaatgtt
tacaggctagatgcagcggatcagcaggaagaagctgttgcaatcagcatgatcatgcgt
gaggcgatcgaaaaaccaatgcatcgcgtcgcccttgtaacgccagatagagtattggct
gcacgtgtggcaacggaactggcacgctggggtgtgctggcggatgacagtgcaggctca
tccttggtggatacacctgcggctgttttattacgtcttgttgctcaaatggtggatagc
agattttcgccagtttctcttttgagtgttttaaaacatcctttggttgcatgtggtttt
tcatcaggtgtctgccgtgcaacagcacgccttttggaacgtgctattttgcgtggtcca
gcacctcctcctgggtttgcagctttatgtcgggttgtgaataatgctttagaaaacctt
aatgaaagagcaaaagctaagctggaaggcggtattacggcggataggccttttggtccg
gtagcattgtctgttttcatgcagcgtttagctttttgtctggaaccggttcttggatgg
gagctggatgcggtagaagcaagcgtgcagacagcgcaagatttagagcagcattgcgcg
cctgtgccagacttacttgctgcattaattgcaacagtagagcgtttggttgcaactgat
gaagaaagcgcatcagagcgtttatggcgtggtgaagaaggcaatatgcttgccagccag
ttaacagagttgatgttagcatcagaggttttaccgcctcaaccgcctgttgttttggat
ggcttgttaacagcagttcttgctcctgaacgcgttgccatgcgccgaggtggagacccc
aaatctttacatccacgtgttttaatctggggtttgtttgaatcacgcttgcaaacagca
gaaacagttattctgggcgggctttctgaaggtgtgtggccgcccgtagtagatgctggc
ccatggatgagccggcctatgcggcaaagaatggggcttccatctccagagcaggcagta
gggcaggccgcgcacgatttttttgcaagcgcagccgccgcagatacagttattctttcc
agcgcacggcggagagaaggtgcacctgttgttccggccagatggcttacgcggcttgat
gcttttttggctggccgtaatgggtatattcctaatcaccctgctttagtttggttgaat
aagttggatcagccattagggccagcaacacctgttgcaccaccgcaacccatgccccct
gttgcattgcggccacgtcgtttgagtgtgacagaaatagaaacttggataagagatcct
tacgctatttacgcaaaacacattttgcgccttgaagtcttgccagagttggaagaagca
gccgatgcatctgactatggtatgattgtgcataaggcgttggagcgctgggtaaaagct
tatgctgtggcatggccagagaatgcagaaaagaaattatgcgatttattttctgcaagt
ttacaggaacatgttttgcgcccagcattgcgtgcatggtgggcgcccagattaacacgt
attgcccgatgggtggtgcaggctgaagaaaaacgacgtagtgaacacggtgtgccgcgc
gctattctgacagaaattcgtgggcgtgtgagcattatggatgctccaggtggtaagttt
gacattgttggtcgggcagaccgtatagaattgaatgctgatgggcatgtgattgtgcag
gattataaaacgggcacattaccctctgccaaagatgtttgggccggttggagcccgcag
cttccgcttgaggctgctatgattattcggggtggttttaaagaggttcccgaacattca
agagaaatatcagatcttatttattggcgcctaacgggtggtgctgatccgggagaggag
gtggttgtgaagacccgtgaagcactcagccttaccgatctggccgaacaaacttgggaa
aatttgctattgcgggtggcagcatacgatcaaccagatcaaccttatctttctcatccc
catccgggcagagagccgcgctttgccgattatgcacgtctggcgcgtgtgcctgagtgg
aattcagcccgtaaggaggatgaggaatga
DBGET
integrated database retrieval system
