KEGG   Acetobacter sp. JWB: DS739_12830
Entry
DS739_12830       CDS       T05544                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
acet  Acetobacter sp. JWB
Brite
KEGG Orthology (KO) [BR:acet00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acet03032]
    DS739_12830
   03036 Chromosome and associated proteins [BR:acet03036]
    DS739_12830
   03400 DNA repair and recombination proteins [BR:acet03400]
    DS739_12830
DNA replication proteins [BR:acet03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    DS739_12830
Chromosome and associated proteins [BR:acet03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    DS739_12830
DNA repair and recombination proteins [BR:acet03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      DS739_12830
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_euk_1 VWA_3 HU-HIG HU-CCDC81_bac_2 DUF7406
Other DBs
NCBI-ProteinID: AXC27534
LinkDB
Position
complement(2717481..2717750)
AA seq 89 aa
MSKAFIAAVIQDSINCTGVAANQAANDLIDAIVEELKREGGFTLPSFGTFTVRKTKARKA
LNPRTGEQVKVKAGKTVRFKASPNLKKAV
NT seq 270 nt   +upstreamnt  +downstreamnt
atgagcaaggcctttattgcagcagtgatccaggactcgatcaactgcaccggcgttgcc
gccaatcaggcagcgaatgaccttattgatgcgattgtagaagaactgaagcgtgaaggt
ggttttacacttccttctttcggaacgtttacagtgcgtaagaccaaagctcgtaaggcc
ttgaaccctcgcacgggtgagcaggtaaaggtcaaagctggcaaaacggtacgttttaaa
gcaagtccgaatctgaaaaaggctgtttaa

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