Candidatus Aciduliprofundum sp. MAR08-339: AciM339_0247
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Entry
AciM339_0247 CDS
T02396
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
acf
Candidatus Aciduliprofundum sp. MAR08-339
Pathway
acf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AciM339_0247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acf03400
]
AciM339_0247
Enzymes [BR:
acf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AciM339_0247
DNA repair and recombination proteins [BR:
acf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AciM339_0247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF1796
Motif
Other DBs
NCBI-ProteinID:
AGB04144
LinkDB
All DBs
Position
complement(200352..201125)
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AA seq
257 aa
AA seq
DB search
MSMELLLMSWNVNGIRAAVRNGFLKFLEKYNPDILALQEIKAREDDIPLEVRYYEGYRKF
FNPARRKGYAGTALFTKIEPESVSFGIGDERFDSEGRVITAEYERFYLVNAYFPNSQHGL
TRLDFKIEFDRKIHAYLNELRRSKPVVLCGDFNVAHKEIDLANPKQNEKNAGFTPEERAW
MDEFLNDGYVDTFRMFTKEGGHYTWWTYRFNARARNIGWRVDYFVVSKDLVPHVKKSWIM
SDVYGSDHAPIAMILEI
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggagctcctgcttatgtcctggaatgtgaacgggattcgtgctgcagtgcgc
aacggttttctgaagtttcttgagaagtacaaccccgatattcttgcccttcaggagata
aaggccagggaggatgacatcccattggaggtacgctattacgagggataccgcaaattt
ttcaatcctgcaaggaggaagggctatgcgggaactgcattgttcactaagatcgagcct
gagagtgtgagttttggcatcggggacgagagatttgactctgagggcagggttataact
gcggagtacgagaggttctaccttgtgaatgcgtattttccaaattcccagcatggcctc
acccgcttggatttcaagatagaatttgacaggaagatccacgcctatctaaatgaactg
cggagaagcaagcctgtggtgctctgtggggatttcaacgttgcccacaaggaaattgac
ttagcgaatccaaagcagaatgagaagaacgctggattcacccctgaggaacgtgcatgg
atggatgagtttttaaatgatggttatgtggacacattcaggatgtttaccaaggaagga
gggcactatacctggtggacctacaggttcaacgcccgtgcccgcaacataggatggcgt
gtggattactttgttgtgagcaaagatctggttccccatgtgaagaaatcttggatcatg
agcgatgtctacggatcggaccatgcacccatagcgatgatactggaaatttag
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