Aciduliprofundum sp. MAR08-339: AciM339_0249
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Entry
AciM339_0249 CDS
T02396
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
acf
Aciduliprofundum sp. MAR08-339
Brite
KEGG Orthology (KO) [BR:
acf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acf03032
]
AciM339_0249
03400 DNA repair and recombination proteins [BR:
acf03400
]
AciM339_0249
Enzymes [BR:
acf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AciM339_0249
DNA replication proteins [BR:
acf03032
]
Prokaryotic type
DNA Topoisomerases
AciM339_0249
DNA repair and recombination proteins [BR:
acf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AciM339_0249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
YscO
Nnf1
Motif
Other DBs
NCBI-ProteinID:
AGB04146
LinkDB
All DBs
Position
complement(202178..204547)
Genome browser
AA seq
789 aa
AA seq
DB search
MRIFEVSIDEEMKNSYMDYAMSVIVSRAIPDVRDGLKPVHRRILYGMYELGLMHNKPYKK
SARIVGEVMGKYHPHGDQAIYNTLARMAQDFSMRYVLVDGQGNFGSIDGDAPAAMRYTEA
RLSRIAEEMLRDIDMDTVDFMPNFDGSLKEPVVLPARIPNLLINGSSGIAVGMATNMPPH
NLGEVVDALVYLIDNPDADVGELLNYVSGPDFPTGGQIIGYGGLVDAYTKGKGKIRIRAK
YEIEGDKIIVREIPYEVNKSNLLKKIASLVREDKIRGISDLKDESDRDGIRIVIKVKRDT
NPEIVVNQLLEHTDLEVTYGIINLVLVNGVPRVLNLKELLQEYLKHRMDVLVRKLNYQLK
RARERKHIIEGLVRALEMIDEVIATIKASRNVKEAMENLISMGFSDLQAKAILEMRLQKL
TSMEIAALREENRKLEEDIARMEDLLAHEEKRYGVIRDELLEIKKNYGDERKTEILREAI
ERRDIEDLIPNKPAIIILTEKGYIRRMSPEEYRPQGRGGKGLIINYGEGDLPRDIVKANL
HDYLLFFTRNGRVYWLKAYNVPEGSRRSRGRAIINVLPKLGSEVVRMLSVSDFHGYLFFV
TKNGVVKRTPLEYFSHPRSLGIRAITFDEDDELVDVLITSGSEDVFLFTKFGMAIRFRED
DVRSMGRTARGVRGIMLREGDEVISAGTTLNGHFVLTILSSGYGKRTNVNEYRLIKRGGY
GVKNINTRGAFVVKSMLVGDTEEILLLTREGKSIRIPVSQMSVLGRTARGVRLIKLENGD
EVVNAAKIS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatttttgaagtttcaattgatgaggagatgaagaactcctatatggattacgcc
atgagtgtcatagtatcccgtgccattcctgatgtgcgtgacggtctgaagcccgtgcac
cgacgcattctctacgggatgtacgagctgggtttgatgcacaacaaaccctacaagaag
agcgccaggatagtgggagaggttatgggtaagtaccacccccacggggatcaggctata
tacaatacccttgcaaggatggcccaggatttctcaatgcgttatgttctcgtggatggc
cagggcaacttcgggagcattgacggcgatgcccctgcggctatgcgatacactgaggca
agattatccagaatcgcagaggaaatgcttagggacattgatatggacaccgttgatttc
atgccaaattttgatggatcgctcaaggagccagttgttcttcccgcaaggattccaaat
ctcctaataaacggttcctcgggcatagccgttggaatggccacaaatatgccaccccac
aatctcggcgaggtcgttgatgctctcgtgtaccttattgacaatcccgatgcggatgtt
ggtgagttgctaaattatgtcagcggcccagattttcccacaggtgggcagattatagga
tacggtggccttgtggatgcctataccaagggcaagggtaaaataaggataagggccaag
tatgagatagagggggataaaatcatagttcgcgagattccctatgaggttaacaagagc
aatcttctcaagaaaatagcatctctggtgcgggaggataagattcgaggcatatcggat
ctgaaggatgaaagtgatagggacggcataaggatcgtaataaaggtgaagagggataca
aatccagaaatagtggtcaaccagcttctggagcacacggatcttgaggttacctacggc
ataatcaatctcgtccttgtgaatggagtccccagggtgctcaatctcaaggaattgctg
caagagtatctgaagcacaggatggatgtgcttgtgagaaaattgaattaccagttgaaa
agggcaagggagaggaagcacataatagagggtctcgtgagggcccttgaaatgatcgat
gaggtgatagcaaccataaaggcatccagaaacgtgaaggaagctatggagaatcttatt
tccatgggattctccgatttgcaggcaaaggctattcttgagatgagattgcagaaactc
acgagtatggagatagcggcgcttagagaggagaacagaaaacttgaggaggatatagcc
cgaatggaggacctgcttgcccacgaggaaaagaggtacggagttataagggacgaactc
ctggagataaagaagaactacggggatgagagaaaaaccgagatcttgagggaagccata
gagcgtagggatattgaggatttgatacccaacaaacctgctataatcatattgacggag
aagggatacatcaggagaatgagccctgaagagtaccgtccccaggggcgtggaggcaag
ggattgatcataaattacggagagggagatttgcccagggacatagtgaaggccaatttg
cacgattacctcctgttcttcaccagaaatggacgtgtttactggctcaaggcctacaac
gtgccggagggctctcggaggagcagaggcagggctataatcaacgtccttccaaaactg
ggaagcgaggtagtcaggatgctatcggtgtccgatttccatggatacctatttttcgta
accaagaatggcgtggtgaagcgcacaccccttgagtacttctcacatcccagaagtttg
ggcataagggccataaccttcgatgaggatgatgaacttgtagatgtgctcatcaccagc
ggcagtgaggatgtatttctattcacaaagtttggaatggccataaggttcagggaggat
gacgtccgttccatgggtcgcaccgcccggggcgtaaggggtataatgctcagggaagga
gatgaagttatatcagcaggcaccaccttgaatggacattttgtgctaacgattctcagc
agcggatatggaaagagaacaaatgtgaatgagtaccgcctgataaaacgagggggctac
ggagtgaaaaacataaacacaaggggagcgttcgtggttaagagcatgcttgtgggagac
acggaggagattctgcttctcacaagggagggcaagagcataagaataccagtttcccaa
atgtccgttctaggaaggacggcccgtggagtgagactcataaagctggaaaacggggat
gaggttgtaaatgcggccaagatctcctag
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