Aciduliprofundum sp. MAR08-339: AciM339_0430
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Entry
AciM339_0430 CDS
T02396
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
acf
Aciduliprofundum sp. MAR08-339
Pathway
acf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AciM339_0430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acf03021
]
AciM339_0430
Transcription machinery [BR:
acf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
AciM339_0430
Prokaryotic type
Archaeal type
TFB
AciM339_0430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Cyclin_C
Sigma70_r4
Cyclin_N
UPF0253
LysW-like_globular
DUF6398
A2L_zn_ribbon
RB_B
Lar_restr_allev
Sigma70_r4_2
Zn_Tnp_IS1595
Trm112p
Ribosomal_S27e
zf-RRN7
OrfB_Zn_ribbon
KORA
HTH_Tnp_ISL3
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AGB04318
UniProt:
L0HLX5
LinkDB
All DBs
Position
complement(373852..374793)
Genome browser
AA seq
313 aa
AA seq
DB search
MGDMMARRPKEEYIKQCPECGSTHLIWDYERGELVCGDCGAVIEDSFIDQGPEWRAFDAE
QDEKRARTGAPLTFLSHDKGLATEISWSNKDSYGKRIPHKNRAQIYRVRKWHQRIRVSNA
AERNLSVALQELNNVSSKMGLPKDVRETAAIIYRKAVEKNLIRGRSIESIVAASIYAACR
KVGMPRTLDEVAKASELNKKKIGRAYRHLTKELNLNLKPTTANSYITQFCSKLRLDKNVV
NKAEEIVQKATDVGITSGKGPTGVAAAAIYIAANMLNEPRTQKEIAEVAGVTEVTIRNRY
KEISTALHMEISK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatatgatggcaaggagacctaaggaggaatatataaaacaatgtccagagtgc
ggttccacccatttgatatgggattatgagcgtggtgaacttgtttgtggtgactgtggg
gctgttattgaggattcctttattgaccagggccctgaatggagggcttttgatgcagag
caggatgagaaaagagccagaacgggtgctccacttacatttttatcccatgacaagggt
ttggccacggagatatcttggagcaacaaggattcttatggaaagcgcatacctcacaaa
aacagggcccaaatttacagggttcgaaagtggcaccagagaatacgcgtgagcaatgca
gccgagaggaatctatctgtggcattgcaggaattgaataatgtatcaagcaaaatgggc
ctccccaaggacgtgcgcgagacggcagccataatataccgcaaggccgttgaaaagaat
ctcattaggggaaggagtatagagagtatagtggcagctagtatatatgcggcctgtcgg
aaggtgggtatgcctcgcacccttgatgaggtggccaaggccagcgagctcaacaaaaag
aaaattggcagagcgtacaggcacctcactaaggagttgaatttgaatctcaagcccaca
acggcgaattcttacatcacgcaattctgcagtaaattgcgtttggataagaacgtagta
aacaaggctgaggagatagtgcagaaggccacggatgttggtataacttcaggaaaggga
cccacgggagtggcggcagcagccatctacatagcggccaatatgctcaacgagcccagg
acacagaaggaaattgcagaagttgctggtgtaactgaagtgaccataaggaatcgctac
aaagagatttcaactgccttacatatggaaatttcaaagtga
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