Aciduliprofundum sp. MAR08-339: AciM339_0568
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Entry
AciM339_0568 CDS
T02396
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
acf
Aciduliprofundum sp. MAR08-339
Pathway
acf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AciM339_0568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acf03021
]
AciM339_0568
Transcription machinery [BR:
acf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
AciM339_0568
Prokaryotic type
Archaeal type
TFB
AciM339_0568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
RB_B
Zn_ribbon_LysW
Cyclin_N
BRF2-like_C_cyclin_rpt
UPF0253
Zn_ribbon_IS1595
DUF7573
Zn_ribbon_PaaD
Lar_restr_allev
Zn_ribbon_3
Auto_anti-p27
Trm112p
At4g08330
Zn_ribbon_8
HTH_AsnC-type
Zn_ribbon_tTFIIB
HTH_Tnp_ISL3
Zn_ribbon_9
Zn_ribbon_5
Motif
Other DBs
NCBI-ProteinID:
AGB04455
LinkDB
All DBs
Position
complement(490597..491535)
Genome browser
AA seq
312 aa
AA seq
DB search
MAEKDKKKWIDEITRCPECGSTHLVRDYERGELVCMDCGLVIDEAYIDQGPEWRAFDSEQ
RDSRSRTGAPMTYTIHDKGLSTEISWKNKDSYGKSIPTRSRAQLYRLRKWQKRIRVSNSA
ERNLSQALQELERMASNLGLPKDVRETAAVIYRKAVKENMIRGRSIEGVVAASIYAACRM
LGIPRTLEEISTVTRIKKREIGRVYRIMSRTLKLNIYPTKPEDYIDRFCSKLKLSGEVKT
KAYEIIKMARERDIISGRGPTGVAAAAIYIAAILMGERRTQREVADVAGVTEVTIRNRYK
ELVEKLNLPVEV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaaaaagataaaaagaaatggatagatgagataactcgctgcccggaatgtggc
tccacgcaccttgttagggattatgagcgtggtgaactggtatgcatggattgtggtctc
gtgattgatgaggcttatattgaccaggggccagagtggagggcctttgattctgagcag
agagattccagatcaagaacaggagcgcctatgacctacactattcacgataagggactg
agtactgaaatttcttggaaaaataaggattcttatggcaagagcattcctacaaggagc
cgtgctcagctttacaggcttcgtaaatggcagaagaggattcgtgtcagcaactcagcg
gagagaaatttgagccaggcactgcaggaacttgagagaatggcatccaatttgggattg
cctaaggacgtacgtgaaactgcagctgtgatctatcgcaaggctgtgaaggagaatatg
atccgggggcgcagcattgagggggtggtggcggccagcatatacgctgcctgcaggatg
ctgggaataccccgcacccttgaggaaatatctacagtcacaagaataaagaagagggag
ataggtagggtttacaggataatgagcagaacattgaagctcaacatatacccaacaaag
ccagaggactacatagatcgtttctgctcaaaattgaagctgagtggtgaagttaagacc
aaggcctacgagattattaagatggcccgggagagggatataatatctggccgcggtcca
acgggcgtggcggcggctgcaatttacatagcggccattctaatgggggaacggagaacg
cagagggaagttgccgatgttgccggcgtgacggaggtaaccataagaaatcgttacaag
gagcttgtggagaagttgaatttgcctgtagaggtttaa
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