Aciduliprofundum sp. MAR08-339: AciM339_0646
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Entry
AciM339_0646 CDS
T02396
Name
(GenBank) superfamily II helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
acf
Aciduliprofundum sp. MAR08-339
Brite
KEGG Orthology (KO) [BR:
acf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acf03400
]
AciM339_0646
Enzymes [BR:
acf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AciM339_0646
DNA repair and recombination proteins [BR:
acf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
AciM339_0646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_dom4_arc
HHH_5
ResIII
Helicase_C
HHH
DEXQc_Suv3
HHH_2
HTH_61
DNA_pol_lambd_f
HHH_3
HHH_8
UPF0758_N
Motif
Other DBs
NCBI-ProteinID:
AGB04530
LinkDB
All DBs
Position
complement(560490..562589)
Genome browser
AA seq
699 aa
AA seq
DB search
MKISDIPLKREWLQIFEEEGIRELYPPQEEAIKKLFKGKNLVVAIPTASGKTLVGYIAIL
RAFKMGLKSVYIVPLRALAMEKYEELKRFERFGMRVALAIGDYDSPSGYLKHYDVVIATS
EKMDSILRHDLEYAYNLGVVIVDEVHLMGEPTRGPTLEMVISKIRDVNDEAQIIALSATI
KNSEEIASWLEGEHVYSEFRPVPLKLGVYFDDTLLFENGETINVPHDGINIGNLVSRSIE
LGGQVLIFVNRRKSAESLAEKLRRRVDKYLSKEDREALMNISKELQEEEYTIYGERLTKM
IRHGVSFHHAGLSNRQRSVIERAFKGRWLKVIVATPTLAAGINLPSRTVIVRDVTRYDGF
TSVYIPVMEVKQMLGRAGRPKYDKYGEGIIYARSASRAKEYMETYILGETEDIESQLSND
AALRIHVLALIASDMVNKEGELFDFFSKTFYGFKMPVKYLNKKIEHVLNFLEANEFITRK
RLILATPLGKRVSDLYIDPYTAIFFKKCYSKDYDEFCILHTIACTPDIIPIRAKKSELPE
LLPVAYTHDLAIDEFDVDQDTFFGALKTALMIMDWTNEVSQDRLIGRYDVGPGDIHGRVE
ITDWLLYAFAEIGRVLKYPHVHQVEKLRLRVKYGVREELLPIVSLKGIGRVRARRLFDYG
FNSIEKLRKAKVSQLTRIPGIGEKLAHEILKQARREILK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcagtgatattcccttgaaacgtgagtggcttcagatttttgaagaggagggt
ataagagaactctatcctccccaggaagaggcaataaaaaaacttttcaaggggaaaaac
cttgttgtggcaattccaactgccagcggcaaaacactggttggatacattgcaatttta
agggcattcaaaatgggactcaaaagtgtgtacattgtgccactcagggctctagccatg
gagaaatatgaggagctgaaaagatttgaaagatttggaatgcgtgttgcactggccatt
ggagattacgacagcccttccgggtacctgaaacattacgacgttgtgattgcaaccagc
gagaaaatggattccatcctacgccatgacctagaatacgcctacaacctaggcgtggtg
atagtggacgaggttcatctgatgggagagccaacccgcggcccaaccctggaaatggtg
atttcaaaaataagggatgtaaatgatgaggcacagataatcgcgctctcggcaacaata
aaaaattctgaagaaattgcatcttggcttgaaggagagcacgtctatagtgaattcaga
cccgttcctttgaaactgggcgtatactttgacgatactcttttatttgaaaatggagaa
acaataaacgtaccccatgacggaataaacatagggaaccttgtaagcaggagcattgaa
cttggtgggcaggtgctcatctttgtaaatcgacgaaaatctgctgaatcccttgcagag
aaactgaggaggagggttgataaatatttaagcaaggaggatagggaagcgcttatgaac
atatccaaggagctgcaggaggaggaatacaccatttacggagagagactcacaaaaatg
ataaggcacggggtctccttccaccatgcgggactgagcaacaggcagagaagcgtcatt
gaaagagcgtttaagggcagatggctaaaggtgatagttgccactccaaccctggcagcg
ggaataaatttaccctctcgcacggttatagtgagagatgttacaagatacgatggattt
acaagtgtgtacatacccgtaatggaagtaaagcagatgcttggccgcgcaggaaggccg
aagtatgacaagtacggagaggggataatttatgccaggagcgccagcagggccaaggag
tacatggagacgtacattcttggtgagacggaggatatagaatcacaactttcaaacgat
gcagcgttgagaatccacgtgcttgcccttattgcaagtgacatggtaaacaaggagggg
gaactgtttgatttcttttcaaaaacattctacggattcaaaatgcctgtgaaatatctg
aataagaaaattgagcacgttttgaattttcttgaggctaacgagttcataacccgaaag
agattaatactcgcaactccccttggaaagagggtttcggatctgtatattgacccatac
acagcgatattctttaaaaaatgttacagtaaggactatgacgaattctgcattctacac
accatcgcctgcactccagacatcattccaatcagggccaaaaagagcgagttgcccgaa
cttctgcccgtggcctacacccacgatcttgcaattgatgaattcgatgtggatcaggat
acattcttcggagcactcaaaactgctttgatgataatggactggacaaatgaggtttct
caggacagacttataggcaggtacgatgtgggtccgggggatatccatgggagggtggag
ataacagactggcttttatacgcatttgcagagataggaagggttctaaagtatccccac
gtgcatcaggtagaaaaattgagattgagagttaagtatggagtcagggaagagctgctg
cccatagtctctttaaagggtattggacgtgtgagagcgcgcagattgtttgattatggt
ttcaattcaattgaaaaactgcgcaaggctaaagtttcgcagttaaccagaattccaggc
ataggtgagaaacttgcccacgagatcttaaaacaggcacggagggagattttaaaataa
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