Aciduliprofundum sp. MAR08-339: AciM339_1400
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Entry
AciM339_1400 CDS
T02396
Name
(GenBank) DNA-directed RNA polymerase, subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
acf
Aciduliprofundum sp. MAR08-339
Pathway
acf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AciM339_1400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acf03021
]
AciM339_1400
Enzymes [BR:
acf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AciM339_1400
Transcription machinery [BR:
acf03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
AciM339_1400
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
CarD_C
Motif
Other DBs
NCBI-ProteinID:
AGB05256
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All DBs
Position
complement(1273705..1275255)
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AA seq
516 aa
AA seq
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MGMSIIWKDKTENIDKIRLNVPVYYAVDFEIKREVELPIYGYITLKGSEVNYRVKITEIK
PYQSLKGIVKKTTKKLKTLLKIEEVQDISAIPLSEFKKEDGTYLKRVTKFSYGELEERGE
IKIKKFEELSADERALQERIENEYGLKLPVSIIQKLLQAKNEHGLSKNEFNEVIKRTVEV
YRKRSVDPYEAVGIVAAQSIGEPGTQMTLRTFHYAGVAEMNVTLGLPRLIEIVDARSMPS
TPVMEIHLKEGIREDEDRVKEVAKKIESTEIIDVADVITSLVDMSVVIVPDKKKMEGRGV
KKEDIVESLGKLKIQKLTVEIEGERIKIKLPEPSYKKLYLLSENIKGLTLRGIKGISRAI
VRKSQDNSEWVIYTQGSNLGDVLDIEEVDAARTRTNNIIEIADVLGVEAARNAIIEEALN
TLHQQGLNVDIRHIMLVADTMTYNGTVEAIGRHGIAGEKESVLARAAFEITSKHLLTAGI
LGEEDQLRGVAENIIVGQPVTLGTGAVTLVYKPKKR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgagcataatctggaaagacaaaactgaaaatattgacaagattcgcctcaac
gttcccgtgtactatgcggtggattttgaaataaagagggaagttgaattacccatctac
gggtatatcactctgaagggctcggaggtaaactacagggtaaagatcacagaaataaag
ccctaccagagtttgaagggaatagtcaagaaaacaacaaaaaaactcaagacccttctc
aaaattgaggaagttcaggacatatccgccattccgctttctgagttcaagaaggaagat
ggtacttatttgaaaagggtcacaaagttctcatatggggaacttgaagagaggggcgag
ataaaaataaagaaatttgaagaactcagtgctgatgaaagggctcttcaggagagaatt
gagaatgagtatggtctcaagcttcctgtttccataatacagaaactcctacaggccaag
aatgagcatggactaagcaagaacgaatttaacgaggttatcaaaagaaccgttgaggtt
tacaggaaacgctctgtggatccctatgaggctgttggaatagtggctgcccagagcatt
ggagagccgggtacacagatgaccctaaggaccttccactatgcaggtgtggccgagatg
aacgttactctcggtttgcccaggttgatagaaatcgtggatgcgaggagcatgccatcc
actcccgttatggagatacatctcaaggagggtataagggaggacgaggatagagtcaag
gaagtggcaaagaagattgagagcaccgagataatagatgtggccgatgtgatcacgagc
cttgtggatatgtcggtcgtaatcgtgccggataagaagaagatggagggaaggggtgtg
aaaaaggaggatattgtggagagtttgggcaaactaaagattcagaaattgaccgtggaa
attgaaggagagcgcataaagatcaaattgcctgaaccatcctacaagaagctgtacttg
ctcagcgagaatataaaggggttgactctgcgcggtataaagggcatatcaagggcgata
gttagaaagagccaggacaatagtgaatgggttatttacacacagggttcaaatcttggt
gatgtgcttgatattgaagaggttgatgctgccagaacaaggaccaataacataattgag
attgcggatgtgcttggagtggaggcggccagaaatgcgataatcgaagaggcgctgaac
acccttcaccagcaaggtttgaatgtggatatccgccatataatgcttgttgctgatacg
atgacctacaatggaacagttgaggctataggcaggcacggaattgcaggtgagaaggag
agtgttctggcaagggctgccttcgagataacatcaaagcatctcttgaccgctggaata
ctcggagaggaagatcaactgagaggtgtggcggaaaatattatagtgggtcagcctgtt
actctaggtacaggtgctgtgactctggtgtataaacctaaaaagaggtga
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