Aciduliprofundum sp. MAR08-339: AciM339_1401
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Entry
AciM339_1401 CDS
T02396
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
acf
Aciduliprofundum sp. MAR08-339
Pathway
acf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AciM339_1401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acf03021
]
AciM339_1401
Enzymes [BR:
acf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AciM339_1401
Transcription machinery [BR:
acf03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
AciM339_1401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AGB05257
LinkDB
All DBs
Position
complement(1275256..1277943)
Genome browser
AA seq
895 aa
AA seq
DB search
MTRHVFGLTKRINSIKFSLLSPEEIRRMSAVKVITADTYDDDGFPIDKGLMDLHMGVIEP
GLRCKTCGGKVDECPGHFGHIELAMPVIHVGFVKNIKNYLDATCRECGRIKLKDDEIEIY
KQKIEEAKNMGASPLELLFITKKIIDDASSRPICPHCGAEQKKITLDKPTTFREEGRKLT
PKEIRERLERIPDEDLPLLGMNPETARPEWMVLTVLPVPPVNVRPTITLETGERSEDDLT
HKLVDIIRINQRLRENRDSGAPQLIIEDLWELLQYHVTTYFDNQTSGIPPARHRSGRPLK
TLVQRLKGKEGRFRSNLSGKRVNFSSRTVISPEPFLSINEVGVPVAAARELTVPITVTEY
NIEKMREIIRRGPNPEGEKYVPGANYVIRPDGRRIKITERNAEEVAKKIDLGWIVERHLI
DGDIVLFNRQPSLHRMSMMGHLVKVLPQRTFRFNLAVCPPYNADFDGDEMNLHVLQSEEA
RAEAKILMLVQEHILSPRFGGPIIGGLHDHITAMFLLTHKNPKFTKDEAIHILSYLDYDS
LPEPHRDENGNEFYYGKDLFSLILPKDLNMEFKSKICDPSVCKNKCVYEKCPIDAYVVIR
NGKLVAGTIDENAIGSMKGKLLDRIAKRGSDTARKFIDDMTRLAVGVISYRGFTSGIDDE
DIPEEAIIQIHEIIQESMKKTDELIELYRQGLLQPAPGRSVEETLEMEIMRVLAHARDEA
GKIASKHLGLENSSVIMARSGARASMLNLSQMAGSIGQQSVRGQRLHRGYQDRTLPHFKR
GDLGAKARGFVESSYKKGLNPTEYFFHSMGGREGLVDTAVRTSRSGYMQRRLINALEDLK
VTEDRKVIDTGGNVVQFFYGEDGVDPTRSSGGENIDIDEILTDVLGDKYLLRRRK
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggcacgttttcggtctcacgaaaaggataaactccataaaattctctctgctc
tcccctgaggagataaggagaatgagcgctgtaaaggtcataactgctgatacctacgat
gatgatggttttcccatagataagggtcttatggatctgcatatgggtgtaatagaaccg
ggactgcgctgcaagacctgcggtggtaaggttgacgaatgcccgggacattttggacac
attgaacttgccatgcctgtgatccacgtggggtttgtaaaaaacataaagaattacctt
gatgccacctgccgcgagtgcggcagaataaaattgaaggatgacgagatagaaatatac
aagcagaagattgaggaagcaaagaatatgggtgcatctccccttgaacttctattcatc
acgaagaaaataattgatgacgcatcctcccgccccatctgtccccattgcggtgccgag
cagaagaaaatcacgcttgataagcccacaacgtttagggaagagggaagaaagctcaca
ccaaaggagatacgggagaggcttgagcgcattccggatgaggatttgccacttctgggt
atgaaccctgaaacggcgaggcctgaatggatggttctgacggttttacctgtacctccc
gtgaatgtgcgccccacaatcactcttgaaacgggagagagaagtgaagatgatctcacc
cacaaacttgtggatataatacgcataaatcagagattgagagaaaatagggatagtggt
gcacctcaactgatcattgaggatctctgggaactgctgcagtaccatgtaaccacatat
tttgacaatcaaacctccgggatacctccggcaaggcaccgcagcgggagacctctgaaa
actctggtgcagcgtcttaagggtaaggagggaaggttccgctccaatctgtctggaaaa
cgcgtgaatttctcatcccgtactgtcatatcgcctgagccgtttctgtcaataaacgag
gttggtgtgcccgttgcggctgcaagggaactcacagtacccataacagtcaccgagtac
aacatagagaagatgcgtgagataatcaggcgcgggccgaacccggagggtgagaagtac
gttcccggtgcaaactacgttattcgtccggatggaagaaggataaagattacggagcgc
aacgctgaggaggttgccaagaagatagaccttggatggattgttgagaggcacctgata
gatggtgatattgtgctattcaacagacaaccctcactgcacaggatgagtatgatgggc
caccttgtgaaggtgcttccacagagaacattccggttcaacctcgccgtttgtccgccc
tacaatgcggactttgatggagatgagatgaatctacacgttttgcagagtgaggaggcg
agggccgaggctaagattttaatgctcgttcaggagcatatcctgtctccaagatttgga
ggcccaataattggtgggctccatgaccacataactgcaatgtttctgctcacacataag
aacccgaaattcacaaaggatgaggcaatacatattctttcttaccttgactacgactcc
cttccagagccacatagggatgagaatggcaacgagttctactatggtaaggacctgttt
tccctgatccttccaaaggatctgaacatggagttcaagagcaagatctgcgatccatct
gtgtgtaaaaacaaatgtgtttacgagaaatgccccatagatgcctacgtggtcataaga
aacggaaaattggttgcaggtacaattgatgagaacgccattggctcaatgaagggtaag
ttgcttgatagaattgccaagcgtggaagcgatactgccagaaagttcatagacgatatg
actcgtctggcggtgggtgtgatctcctatcgtggtttcacttcgggcatagatgacgag
gatattcccgaagaagccataattcagattcacgaaatcatacaggagagcatgaagaaa
acggatgagttgattgaactttacagacaggggctattgcagccagcgcctggcagaagc
gtggaagagacacttgaaatggaaattatgcgtgttcttgcccatgcgagagatgaggcg
ggtaagattgcgagcaagcaccttggattggaaaactcatcggtcataatggccaggagc
ggtgctcgtgcatccatgctgaacctatctcagatggccggaagcatagggcagcagtcc
gtcagaggtcagagattacatcgcggttatcaggatcgcacgcttccgcacttcaagcga
ggggatctcggtgccaaggcccgtggatttgtggaatcctcctacaagaagggattgaac
cccacggagtatttcttccactcaatgggtggtcgagagggtctggttgatactgctgtg
cgtacatcccgctctggatatatgcagcgccgcttaataaatgctcttgaggatctcaag
gtgaccgaagacagaaaggtgatagacaccggcggaaacgtggttcaattcttctatgga
gaggatggtgtggacccgacccgtagttccgggggagagaatatagacattgacgaaatc
ctcacagatgttcttggggataaataccttttgaggaggcggaagtaa
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