Aciduliprofundum sp. MAR08-339: AciM339_1421
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Entry
AciM339_1421 CDS
T02396
Name
(GenBank) ERCC4-like helicase
Organism
acf
Aciduliprofundum sp. MAR08-339
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
DEAD
Helicase_C
ResIII
RNA_helicase_helical
HHH_5
HHH_2
HHH
SNF2-rel_dom
SLFN-g3_helicase
Ribosomal_L1
SWI2_SNF2
UPF0758_N
Flavi_DEAD
RNA_pol_A_CTD
DEAD_2
HHH_8
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGB05275
UniProt:
L0HMM7
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Position
1294441..1296702
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AA seq
753 aa
AA seq
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MPVYISHPLLRDNTVEKREYQVKIAESALKGNTLVVLPTGLGKTIIAILVLVEVLNKKGG
KILFLAPTKPLVEQHARTVKNLTKIENLAVLTGDVGKKKRRGMIKDADIIIATPQVIQND
VISGDINLRDFSLIIFDEAHRAVGNYAYVYIAKKYRESRTDHLILGITASPGGDEEKIME
IIENLGVENVEIRTEEDPDVKRYVKGFQIRWVELPMPSEIKELYTKLKELYNSIITELRK
FGLFVTVRKPTRSDVLRAQKIAQQEIREGKTEFYQAAMLITMAIKIDYALEYLETQGFES
CYNYLMRIIEEGNSKGGSKAARTLVRDERFIEIIRVARRISERMDKMDNPKLNALKTIVR
KEIAANPEIRIIVFTHFRETAQIVADSLNEVPNVRAIRFVGQASKGEDRGLKQREQVEIV
ERFKRGEYNVLVATSVAEEGLDIPATDLVIFYEPVPSEIRSIQRRGRTGRTRLGKVIILT
IKGTRDVAYLWSSRNKEKKMKNELLWLRALLSEKMKDVRKREIFEERKEKKGQLRLFDFE
EDKPELYVDTREFRSDVVKHLSEKYRIVPRQLEIGDYLISDRMIVERKRVDDFLESLKDG
RLFSQILEMRRNYPIPILIIEGESLFIRGFHENAIYGALASIIADYQVPIVFTKDARETA
KFIDSLVKREYSEKREVAVRKEKRPMSDEERQRYIVESLPNVSAKLSQRLLEHFGSVRNV
INAEVGDLIKVKGIGRKTAEEIYEIVNKKYEKT
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgtacatttcccatcctcttctcagggataacaccgtggaaaagagagagtat
caggttaaaatagccgaaagtgcccttaaaggaaacacccttgtggttctccccacaggt
ctgggaaaaacgatcattgccattcttgtgttggttgaggtcctaaacaaaaagggagga
aagatcctttttctggctccaacaaaaccactggtggagcagcatgctcgaactgtaaaa
aacctcactaagatagagaatcttgcagttttaaccggagatgttggaaaaaagaagaga
agaggcatgataaaggacgcggatattataatcgcaacgccacaggtgatacagaacgat
gtaatatcaggggatataaatcttagggatttctccctgataatatttgatgaggcacat
cgtgctgtgggaaactacgcctacgtttacattgcaaagaaatacagagagtcaaggacg
gaccatctcattctcggtataaccgcctcccccggcggagatgaagaaaagataatggag
attatagagaatctgggagttgaaaacgttgaaatacgcacggaggaggacccggatgtt
aagagatacgtcaagggatttcagataaggtgggtggaactaccaatgccctccgaaata
aaggaactttacacaaaattgaaggaactgtacaattcaataataacagaactgagaaaa
ttcggactgtttgttacagtgagaaaacccaccagaagcgatgttctcagagcacaaaaa
atagcccagcaggagataagagagggaaagaccgaattctatcaggcagccatgctaata
acaatggccataaaaatagattatgccctcgaatatctggaaactcagggttttgagtca
tgctacaattacctgatgagaataattgaggagggaaactcgaagggtggcagcaaagca
gcaagaactcttgttagggacgagcggtttatagaaataataagggtggcccgcaggata
tctgaaagaatggataaaatggataacccgaaactaaacgctctgaaaaccatagtgaga
aaggagattgcggcaaatccggagatcaggataattgtattcacccacttcagagagacc
gcacagatcgtggccgattctctgaatgaggtgcccaacgtaagagcgattcgatttgtg
ggacaggcatcaaagggagaggatagggggcttaaacagagggaacaggttgagattgtg
gagagattcaaaagaggtgaatacaacgttctcgtggccacaagcgtggccgaggaggga
ctggacatccctgccacggatcttgtaatattctacgagccagtaccctctgaaataagg
agcattcagcgtcgtggaaggacgggaaggacgaggttgggaaaggttataatactcaca
attaaaggtacgagggatgtggcctatctctggtcatccagaaacaaggaaaagaaaatg
aaaaacgaacttttatggctcagagcactgctaagtgaaaaaatgaaagatgtcaggaag
agagaaatattcgaggaaagaaaggagaaaaagggccagctgaggttgtttgattttgag
gaggacaaaccggagctttatgtggatacccgtgagttcagaagcgatgtggtgaaacat
ctttcagaaaaatacaggatagtgcctaggcaactggaaataggagattacctaatctct
gatagaatgattgttgagagaaagagggtagatgattttcttgagtcgcttaaagatggg
cgcctattctcccagattttggaaatgaggagaaactacccgatcccaattttaataatt
gagggagagagtttattcattcgggggttccatgagaacgccatatacggggctcttgca
tccataatagccgattatcaggtgcccatagtattcacaaaggatgcaagagagacagca
aaattcatagattctctggtaaaaagagaatactcggaaaagagagaagtagcggtgaga
aaggaaaagagaccgatgagtgatgaggagaggcagaggtacattgtagaatcactaccc
aatgtatccgcaaaattatcgcagagactcctggagcattttggaagcgtcagaaatgtg
ataaacgcagaggttggagatctgataaaggtcaagggcataggaagaaaaacggctgag
gagatctacgagatcgtaaataaaaaatacgagaaaacttaa
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