KEGG   Aciduliprofundum sp. MAR08-339: AciM339_1557
Entry
AciM339_1557      CDS       T02396                                 
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit/40 kD subunit
  KO
K03047  DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
Organism
acf  Aciduliprofundum sp. MAR08-339
Pathway
acf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:acf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AciM339_1557
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acf03021]
    AciM339_1557
Enzymes [BR:acf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AciM339_1557
Transcription machinery [BR:acf03021]
 Prokaryotic type
  Archaeal type
   RNA polymerase
    Core subunits
     AciM339_1557
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac NTR
Other DBs
NCBI-ProteinID: AGB05407
LinkDB
Position
complement(1413223..1414044)
AA seq 273 aa
MEFNILDVQDRYIRFEIRGITPAMANALRRTLINDIPKLAIHKVIFHHGQIRDMEGKVYD
SSTPLFDEIIAHRLGLIPLPTDLNMKFRDECDHPPDEGCPLCTVTYTLNKHGPATVYSGD
LIPVGDDKFRPVDPLIPIVKLKEHQAILLEAEAIMGTAKEHAKWQVTSGVTYKYHREIRV
SKKDSELWQKVKDSCPKNVIKEDEEYIVFTDDIPCKAMAELLSFEEPEIIEDDSHFIFEF
ETDGSLTAIDTLEYAIKRLKKRFALLREHAALG
NT seq 822 nt   +upstreamnt  +downstreamnt
atggaatttaacatccttgatgttcaggacaggtacataaggtttgaaattaggggtata
actcctgccatggcaaatgcattgcgcagaactctcataaacgatataccaaaactggcg
attcacaaagtgatatttcaccatggccagatcagggacatggagggcaaggtttacgac
tcatccacgcctctatttgatgagattattgcccatcgtctgggtcttattcctctgccc
actgatttgaatatgaagttcagagatgaatgcgaccatcctccagatgagggctgtcct
ctttgcacggtgacatacacactcaacaaacatgggcctgcaaccgtttattcaggtgac
ctcattcctgtgggtgatgataaatttaggcctgtggatcctctaattccaattgtcaag
ctcaaggaacatcaggccatacttctggaggccgaggcaataatgggcaccgccaaggag
catgccaagtggcaggtgacaagcggcgtgacctacaagtaccacagggagataagggtg
agcaagaaggatagcgagttgtggcagaaggtaaaggattcctgtcccaagaatgtgata
aaggaggatgaggagtacatagttttcacagatgacattccatgcaaggccatggctgaa
ttgctttcctttgaagagcccgagataattgaggatgactcccacttcatcttcgagttt
gagaccgatggaagtttgactgcaattgatacccttgagtatgcaataaagcgacttaaa
aagaggtttgcacttctgcgtgagcatgcggcactgggataa

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