Aerococcus christensenii: AWM71_01395
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Entry
AWM71_01395 CDS
T04262
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acg
Aerococcus christensenii
Pathway
acg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWM71_01395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acg03019
]
AWM71_01395
03400 DNA repair and recombination proteins [BR:
acg03400
]
AWM71_01395
Enzymes [BR:
acg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWM71_01395
Messenger RNA biogenesis [BR:
acg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWM71_01395
DNA repair and recombination proteins [BR:
acg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AWM71_01395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AMB92057
LinkDB
All DBs
Position
complement(275481..276965)
Genome browser
AA seq
494 aa
AA seq
DB search
MDLDQLLKEKTPYKTFRPGQKEALTALIEGRHTLAILATGSGKSLIYQLYHRLVPGLVVM
VSPLQALMEDQVLQLQQAGFKRSVALHSMTTGRDRQFILSHLSQWDFLILSPEMLAQPKI
LKPLRQVPIRLFVVDEAHCISQWGKDFRSDYTGLLACRKILHFPLTLALTATANRRIQED
IETFLLEKEEPLQRVTFSMDRPNLFYGQVKVEESQKREALLSWLKILPKPGIIYVHQKEE
LEDLASFLEEKTPFRLDTYHADRRSEDRLSIQADFQANRLDFILATSAFGMGINQVKTRF
VLHYHLPQSLNEYVQEAGRCGRDGRQAMVLSLYTENEWRRLKFFQDKLWEEKEGVLANLE
AYYRMKERKKKRFLEQLPEELRERLLFYSNHYRWIEEAKTHYMDYLKVRSQEIQEVLAFL
TGKTCLRQQLFRSFDQVLKVSSSSWCCSNCQTLDKNSEILQAYLKSGEAKFLNQEEVQRE
DWRRRLQKLFQTKP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
gtggacctcgatcagttactaaaagaaaagacgccctataaaacctttcgaccggggcaa
aaagaagcacttacagccttgatagaaggaaggcacacactagctatattagcgacggga
agtggaaagagtttaatctatcaattgtatcatcgcttggttcccggtctagtggtaatg
gtttctcctttgcaggctttgatggaggatcaagtcttacaattgcagcaagcgggtttt
aaacggagtgtggctctccattccatgacgacagggagggataggcagtttatcctttcc
cacttgtcccagtgggacttcttaatcctttcaccagaaatgttagctcagccaaagatt
ttgaagcctttaagacaagtccctattcgcttatttgtggtggatgaggcccattgtatt
tctcaatgggggaaagatttccgaagtgactacacaggcttgttagcctgtcgaaagatt
cttcatttccctttgactttggcccttactgcaacggctaatcgaaggattcaagaagat
atcgaaacctttttgttagaaaaagaggaacctttacagcgggtgactttctctatggat
cggccgaatttattttatggccaagtgaaagttgaagaaagtcaaaaaagagaggcctta
ctgtcttggttgaaaattcttcctaagccgggaattatctatgtccatcaaaaagaggaa
ctggaagatttagcgagttttttggaagagaagacgccttttcgtctggatacttaccat
gcggaccgtagaagtgaggatcgcctatccattcaagcggattttcaggctaatcgatta
gactttattctagcgacttctgcgtttggaatggggattaaccaggtgaaaacacgattt
gttttacattatcatctccctcaaagtctcaacgaatatgtgcaggaagcaggaagatgt
ggaagggatggccgtcaggcgatggttttgagtctctacacagagaatgagtggcggcgg
ttgaagttctttcaagataagctatgggaagaaaaggaaggcgtgctggctaatttagaa
gcgtattatcgaatgaaagaaaggaagaaaaaacgctttttggaacaattaccagaagaa
ctgagagaacgattgcttttttatagtaatcattatcgctggattgaagaggcgaagacg
cactatatggactatctcaaagtaagaagtcaggaaattcaagaagtattagcctttttg
acgggaaagacttgcttacggcagcaattgtttcgatcttttgatcaagttttgaaagtc
tcttctagtagttggtgttgttccaattgtcagactttggataaaaattctgagatctta
caggcttatttgaaaagcggagaggcgaaatttttgaaccaagaagaggttcaaagggag
gactggcggcggcgtttgcaaaaattatttcaaacaaagccttaa
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