Aerococcus christensenii: AWM71_04100
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Entry
AWM71_04100 CDS
T04262
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
acg
Aerococcus christensenii
Pathway
acg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AWM71_04100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acg03021
]
AWM71_04100
03400 DNA repair and recombination proteins [BR:
acg03400
]
AWM71_04100
Enzymes [BR:
acg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AWM71_04100
Transcription machinery [BR:
acg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AWM71_04100
DNA repair and recombination proteins [BR:
acg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AWM71_04100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Hva1_TUDOR
Peptidase_M23
KOW6_SPT5
Motif
Other DBs
NCBI-ProteinID:
AMB92531
LinkDB
All DBs
Position
878186..881896
Genome browser
AA seq
1236 aa
AA seq
DB search
MREVDPLVDVNKFESIKIGLASPDRVRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGP
TKDYECTCGKYKRVRYAGVVCDRCGVEVTKAIVRRERMGHIELASPVTHIWYFKGIPSRV
GLILDMSPRSLEEVIYFASYVVTDAGDTALEEKQLLTEREYRDYKKEYGNRFQASIGAEA
IKELLMKVDLETECAELKEELRTAKGQKRTRAIRRLDIMDAFRKSGNRPEWMVLDVIPVI
PPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPVIIVQNEKRMLQEAVDA
LIDNGRRGRPVAGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAIGPHLNFYQ
CGLPKEMALELFKPFLTRELVSREIATNAKHAKRLIDRNDDQVWEPLADIMREHPVLLNR
APTLHRLGIQAFEPVLVEGKAMRLHPLACEAYNADFDGDQMAIHLPLGEEAQAEARILML
AASHILNPKDGQPVVTPSQDMVLGNYYLTQEENGANGEGMVISSPSEAHIAYENGAVQLH
TRIVISPHHFTKFKWTEKQKDQLLVTSIGKLFFNEIMPDNFPFINEPTKENLHKQTDDRF
FVDPGKDYRAFMDQLELTKPFKKGYLEDIIAAIFEKLKVTETSQFLDRLKSLGYYFSTKS
GITVGISDITVLDTKDSWVEKGHKQVENITKQYRRGLITDDERYDEVIKTWNAVKDKIEG
ELTHSLSADNPFFIMMDSGARGNISNFTQLAGMRGLMAGPSGKIIELPVTSNFREGLSVQ
EMFISTHGARKGMTDTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGLEISAIKEGKE
MIEDLAERLTGRYIQKTVYNPKTGEVLAHHNQLITPEKAQQIQEAGVTSVTIRSAFTCRT
RHGVCKCCYGSDLATNGEVEVGEAVGIVAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLP
RVQEIVEARHPKGQAVITEVTGEVVSVHSEEETRTKTVTVKGQTDEREYKVPFTSRMKVA
EGDFVYRGQQLTEGSIDPKELLRITNSLTVLTYMLAEIQRVYRQQGVDINDKHVEVLLRQ
MMRKVRVLDPGASDLLPGNLMDIGDFEDANAEIIRTGQQPATCQPVLLGITKAALETKSF
LSAASFQETTKVLTDAAISGKKDQLLGLKENVIIGKIIPAGTGVPRYRKMEPDKLTPSKV
TEIPMDMDLDFESDLGSGHHLQTVSAPIQSDYHGMP
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
ataagggaggttgaccccttggtcgatgtaaataaatttgaaagtataaaaattggtcta
gcttcacctgatcgcgtacgctcttggtcgtatggggaagtcaaaaaaccagagacgatt
aattaccggacgcttaaacctgaaaaagatggtttgttctgtgaacgtattttcggccca
acaaaagattatgaatgtacctgtgggaaatataaacgcgttcgttatgcgggtgttgtg
tgtgatcggtgtggtgtagaagtaaccaaagccatcgtacgtcgggaacgtatggggcat
attgaactggcgtcacccgttacccacatttggtatttcaaaggaattccaagtcgagtg
ggcttgattttggatatgagtccacgttctttggaagaagttatttattttgcttcttat
gttgttaccgatgctggtgatacagccttagaagaaaagcaacttctaacagaacgtgaa
tatcgtgattacaagaaagaatatgggaatcgtttccaagcttctattggggcagaagcg
atcaaagaactgctcatgaaagtggatttggaaacagaatgcgcagaacttaaagaagaa
ttacggaccgctaaaggacaaaaacggacgcgtgctattcgtcggttagacattatggat
gctttccgtaagtctggtaaccgcccagaatggatggttctagatgttatccctgttatc
ccacctgagttacgcccaatggttcaattggatggtggtcggttcgcaacgagtgatttg
aacgatttatatcgtcgtgtgattaatcgaaataacagattaaagcggttattagattta
aatgcgcctgtgattattgttcaaaatgaaaaacggatgcttcaagaagcagtggatgct
ttaattgacaatggacgtcgtggccgtccagtagcaggtccaggaaatcgtcctcttaaa
tctctttctcatatgttgaaagggaaacaaggacgtttccgtcaaaacttattaggaaaa
cgtgttgactactctgggcgttccgttattgccattggaccacatttgaatttctatcaa
tgtggtttgcctaaagaaatggcattggaattatttaaaccatttttaacacgggaattg
gtatcacgggaaattgcaacgaatgctaaacatgctaaacgtttaattgatcgcaatgat
gatcaagtttgggaacctttagcagatatcatgcgtgagcatcctgttctcttgaaccgc
gctcctaccttacaccggttagggatccaagctttcgaacctgttttggtagaaggaaaa
gctatgcgtttacatccattagcgtgtgaagcttataatgcggacttcgatggagaccaa
atggcgattcacttaccattaggtgaagaagctcaagcagaagctcgaattttaatgtta
gccgcttcccatattttgaatcctaaagacggccaaccagttgttaccccatctcaagat
atggtgttagggaactattatttaacccaagaagaaaatggagcaaatggagaaggtatg
gtcatttcttctcctagtgaagcccacattgcttatgaaaatggtgcggttcaattacat
acgagaattgtgattagtcctcatcactttacaaaattcaagtggacagaaaaacaaaag
gatcaattgttagtaacctctattggaaagttattctttaatgaaattatgccggataac
ttcccgttcattaatgaaccaacgaaggaaaacttacacaaacaaacagatgatcgtttc
tttgttgatcctggaaaagattatcgggcctttatggatcaacttgaacttacaaaaccg
ttcaagaaaggttacttagaagatatcattgcggcaatttttgagaagttgaaagttaca
gaaacgtctcaatttcttgaccgtttgaagagcttaggttattatttctcaaccaagtca
gggatcacagtagggatctcagatattacggtcttagatactaaagatagttgggtagaa
aaaggtcataaacaagttgaaaatattaccaaacaatatcgtcgtgggttaatcacagat
gatgaacggtatgatgaagttattaagacatggaatgctgttaaagataaaattgaaggc
gaattaactcacagtttgtctgccgacaacccattctttatcatgatggactctggagct
cgtggtaatatttctaactttacgcaattagctgggatgcgtggcttgatggctggtccg
agtgggaagattatcgaactccctgttacttcgaacttccgtgaagggttatccgttcaa
gaaatgtttatctcgactcacggggcacgtaaagggatgaccgatacggctttgaagact
gccgactcaggttaccttactcgtcggttagtagatgtcgctcaagatgttattatccgt
gaaacagattgcggaacagatagagggttggaaatttctgccattaaagaaggcaaagaa
atgattgaagacctcgcagaacgtttaaccggtcgttacattcaaaagaccgtttataat
ccgaagacgggagaagtcttagcccatcataatcaattaataaccccagaaaaggcccaa
caaattcaagaagcaggggtaacttctgtaacgattcgctcggcatttacttgtcggaca
cgtcatggcgtatgtaaatgttgctacgggtcagatctagcaactaatggagaagtagaa
gtaggggaagcagttggtattgtggctgctcaatcgattggcgaacctggtactcaattg
acaatgcgtactttccataccggtggggttgccggggatgatatcacccaagggcttcct
cgtgttcaagaaattgttgaagctcgtcatcctaaaggacaagcggttattacagaagtt
acaggtgaagttgtttccgttcattctgaagaagaaacacgaaccaagacggtaactgtg
aaaggacaaacggacgaaagagaatacaaggtgccatttacttctcgtatgaaagtggca
gaaggcgactttgtatatagaggacaacaattgacagaagggtctatcgatccaaaagaa
cttttacgtataaccaattcgttgactgtgttaacctatatgttggctgaaattcaacgg
gtttaccgccaacaaggggtagacattaatgataagcacgtggaagtgttactccgtcaa
atgatgcgtaaagttcgtgtcctagaccctggggcaagtgacctcttgccaggaaacttg
atggatattggtgattttgaagatgctaatgctgaaatcattaggacaggtcaacaacca
gcaacttgtcaacccgtactcttagggattacaaaagctgctcttgaaacgaagagcttc
ttatcagcagcttccttccaagaaaccaccaaggtattgacagatgcagcgattagcggt
aagaaagaccaattacttggtttgaaggaaaatgttattatcggtaagattattcctgcc
ggtacaggagttccacgttatcggaagatggaaccagataagttaacaccatcgaaagtc
acagaaattccaatggatatggatttagattttgaaagtgatttaggatcaggacatcat
cttcaaactgtttctgcaccaatccaatcagactatcatggtatgccttaa
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integrated database retrieval system
