Aerococcus christensenii: AWM71_04320
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Entry
AWM71_04320 CDS
T04262
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acg
Aerococcus christensenii
Pathway
acg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWM71_04320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acg03019
]
AWM71_04320
03009 Ribosome biogenesis [BR:
acg03009
]
AWM71_04320
Enzymes [BR:
acg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWM71_04320
Messenger RNA biogenesis [BR:
acg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWM71_04320
Ribosome biogenesis [BR:
acg03009
]
Prokaryotic type
rRNA helicases
AWM71_04320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
p25-alpha
HTH_22
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AMB92562
LinkDB
All DBs
Position
916900..918393
Genome browser
AA seq
497 aa
AA seq
DB search
MKFESFHLQKELLQGVCEMGFEEASPIQEQTIPYGLEGRDVLGQAQTGTGKTAAFGLPLL
QKLDLAKEGVQALVLSPTRELAIQTGRELYRLGHLKGIRVVTVYGGADIRRQIFQLKKGT
QVVVGTPGRLLDLMSRKVLKLGRVETLVLDEADEMLNMGFIADIEKIIAATPTERQTLLF
SATMPKAIQSIGKHFMKEPVTVKIAAKEVTATTIDQYFTKCKESEKFDVLTRFIDVNRAK
RAIIFARTKRRVDEIAHGLLECGYQAAGIHGDLSQEKRSDVIKMFKEGTLELLVATDVAA
RGLDISDVTHVYNYDIPQDPESYVHRIGRTGRAGNEGMSITFVTSYEMGFLRTIENLTRK
KMSPLRPPTAQEAFSGQMKQSIDKIKTLMERNDEEDCQEVVDYLTGNYTAGQLAFALVRS
QMKPMRKRKNPVSVERGQRGSEHSRSGEKRKRLENKKGHSSRRHGERGSKRTGRNERPHQ
RKTHSKKEKVNTSFTIR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgaatcattccatttacaaaaagaattactccaaggagtgtgtgaaatgggc
tttgaggaagcgagccctattcaagaacaaaccattccttatggactagaagggagagat
gttctaggtcaagcccaaacagggacaggaaaaacagcagcattcggtctccctctgtta
caaaaattagatttagcaaaagaaggcgttcaggctttagttttatcgcctactagagaa
ttagctattcaaacgggacgtgagctttatcgattaggacacttaaagggaattcgagtg
gtcactgtttatggaggcgcagatattcgccgccaaatttttcaattgaagaaaggaacg
caagtggtcgtagggacgccgggacgccttcttgatttaatgagtcgtaaagttttaaaa
ttaggccgcgttgaaacgctggttctagatgaagcagatgaaatgttaaacatgggcttt
atcgcggatatcgaaaaaattattgcagctacgccaacagaacgtcagacccttcttttt
tctgctactatgcccaaagctattcaatcgattggaaaacactttatgaaggagcctgta
acagtaaaaatagctgctaaagaagtgaccgcaacaaccattgatcagtattttaccaaa
tgcaaagaaagcgaaaaatttgatgtcctgacacgctttattgatgttaatcgtgccaaa
cgtgctattatatttgcacgaactaagcgaagagtggacgaaattgctcacggcttattg
gaatgtggatatcaagcagcgggtattcacggagatcttagtcaggaaaaacgttcagat
gtcattaaaatgtttaaagaagggactttggaacttttagttgcaacagacgtagctgct
agaggtttagacatatcagatgtgacccatgtctataattatgatatccctcaagatcca
gaatcttatgttcaccggatcggtcgaactggacgcgcagggaatgaaggaatgtccatt
acctttgttacttcttatgaaatgggcttcttgagaactattgaaaatttaacccggaaa
aaaatgtcgcctttacgtccacctacggctcaagaagcgtttagcggacaaatgaaacaa
tcgattgataaaattaaaacattgatggaacgaaatgacgaagaagattgtcaagaagtg
gttgattatctaacgggtaattacacggctggacaattagcttttgctttagtaagaagc
cagatgaaaccaatgcggaagcggaagaatccagtcagtgtagaacgtgggcaaagagga
agtgagcattcacgatcaggggaaaaacggaaacgtctagagaataaaaaaggccattct
tctcgaagacatggagaacgtggatctaagcggacgggccgtaatgaacgtcctcaccaa
cgtaaaacacactccaaaaaagaaaaagtgaatacttcgttcactattcgctaa
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