Aerococcus christensenii: AWM71_06900
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Entry
AWM71_06900 CDS
T04262
Name
(GenBank) recombinase RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
acg
Aerococcus christensenii
Pathway
acg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AWM71_06900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acg03400
]
AWM71_06900
Enzymes [BR:
acg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AWM71_06900
DNA repair and recombination proteins [BR:
acg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AWM71_06900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
UvrD_C
AAA_12
nSTAND3
AAA_28
SLFN-g3_helicase
UvrD-helicase
NPHP3_N
T2SSE
AAA_25
DEAD
Ploopntkinase3
HHH_8
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AMB93012
LinkDB
All DBs
Position
1438059..1440512
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AA seq
817 aa
AA seq
DB search
MALKKGRLRRMQEEEYFVGEVEATFYSNPDNYYRVVRIRIDETNTLYSEKHIVVTGTFIS
LQEGTTYQFYGHLVDHDRYGVQFQMTRYEQKQVTSKEGLIRYFSSEAFPGIGKVLAERIV
EILGMNALTVILNDPDQLDQVKGLTKTKRTLIKEKIKENQGDQQVFLKLAELGLSNQLAA
KIYAKYGEESAEVVEDNPYLLVKELQGFGFQKADQLAQRLDFERDDPRRLTAALAFCLES
LCYGSGDTKIAKNVLLEETEQILKKGTFSSDIEAQKLEDTLSDLVDIGSLIQEGDFFSLP
SLSFAEKGIVRRLTQLQNSGPKLEAKDWNFDQEIQKSEEKLGIHYGPAQKEALKLALSSK
VFILTGGPGTGKTTVLKGLIDCYARLHDLSLDPDAYDYGEFPIHLAAPTGRAAKRMSETT
NLPASTIHRLLGLTGEEDESQVSESSYGMSIEGDLLIVDEMSMVDTWLFYQLLDQVPNTM
QVILVGDQDQLPSVGPGQVLADLLASQRVVSYELDQIYRQDSRSTISLLAHTIKQGKVPK
DLTQNQPDRSFFQVSYYQMADFVAQVAQRAIAKGYPKKSVQVLAPMYRGQAGIDQLNTSL
QEQLNPNSDGQKREVSFFEQTFRVGDKVLQLQNQPEKNIFNGDIGEITGIFYANETDSET
DELVVNFDDHEVTYLRTDFKKLTLAYCTSIHKAQGSEFSIVILPLLGQYRRMLQRNLLYT
AITRAKKSLILCGEEKAFACAIQTESFKRQTGLLEKLVAEEELLPVLLVKGEEGEEEGTP
VEGTLSKSSVTWLTPEMVLKGEVDPLIGMEGLSPYNM
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaagaaagggaggctaaggagaatgcaggaagaagaatactttgtaggagaa
gtagaggcgactttttatagcaatcctgataactattatcgggtggtacgtatccgaatt
gatgaaaccaataccctctattcagagaagcacatcgtcgtgacgggaacttttataagt
cttcaagaaggcacgacttaccagttttatggacacttagtcgaccacgaccgctatggc
gttcagttccagatgacgcgctacgaacagaagcaagtcaccagcaaagaaggcctgatt
cgctacttttccagtgaagcttttccaggaattgggaaagttctagcggaaaggatcgta
gagatcttaggaatgaacgctttgacggttattctgaatgatcctgatcagctcgaccaa
gtcaaggggctcacgaaaacgaagcgcactcttatcaaagaaaaaattaaagaaaatcaa
ggcgaccagcaagttttcttgaaattagcagaactgggcttatccaatcaactagcagcc
aagatttacgccaagtatggggaagaatccgccgaagtagttgaagacaatccttatctc
ttagtcaaagagcttcaagggttcggcttccagaaggccgatcaattagcccagcgctta
gattttgagagggatgatcccagacgattaacggcagctttagctttttgtttggaaagc
ttgtgttacggcagtggagacaccaagatagcaaaaaacgtcttattagaagaaacggaa
caaatattgaagaaagggaccttctcttctgacattgaagctcagaagttagaggatacg
ctcagtgaccttgtagacattgggagcttgattcaagagggggacttcttcagtttgccg
agcctatcctttgcggaaaaagggattgtcagacggttgactcaattacagaattcgggt
cctaagttagaagcaaaagattggaattttgaccaagagatccagaaaagtgaggaaaag
ttaggtatccattatggtcctgctcaaaaggaagccctcaaactggctttaagttctaaa
gtctttatcttaactggaggacctgggacaggaaaaacaacggttctcaaaggcttgatt
gattgttatgcccgcttacatgacttatctttggatccggatgcttacgattatggagaa
ttccctattcatctcgctgcgccgacgggacgtgccgctaagcgaatgagcgaaacgacg
aacctccctgcttcgaccattcatcgcttgttagggctaacaggagaagaagacgaaagc
caagtcagtgaatccagttatgggatgagtattgaaggagacttattgattgtcgatgaa
atgtctatggtggatacttggctcttttaccagctcttagatcaagttcccaacaccatg
caggttattctggtaggggatcaagatcagctgccttctgttggaccagggcaagttttg
gcagatctattagctagtcagagagtcgtttcctatgagctggatcagatctatcgccaa
gatagtcggtcgacgatttctctcttggcacatacgattaaacaaggaaaagtccctaaa
gacctcacacagaatcaaccggaccggtctttcttccaggtctcttattaccaaatggcg
gattttgtggctcaggtcgctcaacgtgccattgctaaaggctaccctaagaagtccgtc
caggtcttagctcctatgtatcggggacaagcagggattgaccagctcaacacctccctc
caagaacaattaaatccgaactcggacggtcagaaaagggaagtgagcttttttgaacag
actttccgtgtcggagataaggtcctccaattacaaaaccagcccgaaaaaaatattttc
aatggtgatatcggagaaattacgggtatcttctacgccaatgaaacggatagcgagacc
gatgagttagtggtgaactttgatgaccacgaagtgacttatctacggacagattttaag
aagttaactttagcttattgcacatctattcacaaggcacaaggctccgaattttctatt
gtgatcttgcctttactcggacaataccgacggatgctccagcggaatctcctctataca
gcgattacacgtgcgaaaaaatcactgatcctctgtggggaagagaaggcctttgcttgc
gcaattcaaacagagtccttcaagcggcagacgggacttttagagaagctcgtcgctgag
gaagaacttcttcctgttcttctggttaaaggagaagaaggggaagaagaaggaactcct
gttgaaggcactctctctaaatcgtctgtcacttggctcacccctgagatggttctcaag
ggagaggtggacccgcttattggcatggaagggcttagtccttataacatgtga
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