Pseudarthrobacter chlorophenolicus: Achl_0819
Help
Entry
Achl_0819 CDS
T00834
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ach
Pseudarthrobacter chlorophenolicus
Pathway
ach03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ach00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Achl_0819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ach03019
]
Achl_0819
03400 DNA repair and recombination proteins [BR:
ach03400
]
Achl_0819
Enzymes [BR:
ach01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Achl_0819
Messenger RNA biogenesis [BR:
ach03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Achl_0819
DNA repair and recombination proteins [BR:
ach03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Achl_0819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
ACL38814
UniProt:
B8HCN1
LinkDB
All DBs
Position
881619..883856
Genome browser
AA seq
745 aa
AA seq
DB search
MVDIRNATLSQTDADPGADFRADASFAQPSPPGGSGTATHSQALAVLRELVGNSGADFHD
GQYEAIEALVDGGRRTLVVQRTGWGKSAVYFVASLLLRRRGAGPTLIVSPLLALMRDQVA
AAARAGVRAVAINSANQLEWDTVREQLAADQVDVLLVSPERLTNPSFRENQLPELIRRTG
LLVIDEAHCISDWGHDFRPDYRRIADLIEQLPDSVPVLATTATANSRVVHDIEEQLGAGV
LTIRGALGRDSLRLGVLALPDARQRLGWLLTHLSDLPGSGIIYTLTVSAAEDTARLLSEA
GHEVLSYTGRTDPADRERAEQLLKDNQVKALVATSALGMGFDKPDLGFVVHLGAPSSPVA
YYQQVGRAGRGAANADVLLLPGSEDRDIWQYFATASMPSEEKAAAVLTALAEAGSAVSTV
ALEARVDLRRTPLELLLKVLSVDGAVERVGGGWRSTGRPWVYDAERYQRIAEARVDEQDS
MIIYQDTAGCRMEYITSVLDDETAHACGRCDNCAGQWFPADVAADATNAAGQTLSRAGGV
LESRLQWPSGMDRLGVPVKGKIKPPEALSEGRVLARLTDLGWGGALRTVFAAGAEDRPVD
PAMLQACVQVLREWGTGDSRTAGWSGGGRPAAIVSMPSRSKPQLVESLARGISDIGRIPY
LGGLQLAHGGPTGSRGGNSAYRLAGVWDRVVVGTELEAALGSIQGQSVMLIDDLADSRWT
LTVAGRALRQAGAGAVLPLVLAQAG
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggttgatatccggaacgccaccctttcccaaaccgatgctgatcctggtgctgatttc
agggctgacgcgtcctttgcgcagccgtcccctcccggcggttccggtaccgccacccac
agccaggcgcttgcggtgctgcgcgagctggtgggaaactccggggcagatttccacgac
ggccagtacgaggccatcgaggcgctcgtcgacggcggccggcggactttggtggtccag
cgcaccgggtggggcaagtcggctgtctatttcgtggcgtccctcctgctgcgccgccgc
ggggccggccccaccctgatcgtgtcgccgttgctggcactcatgcgtgaccaggtggcg
gctgccgccagggccggtgtccgggccgtggccatcaactcggcgaaccagctggagtgg
gacaccgtccgcgaacagcttgcagcggaccaggtggacgtcctcctggtctcgccggaa
cgtttgaccaacccctctttccgggaaaaccagctgccggaactgatccggcgcaccgga
ctgctggtcatcgatgaggcacactgcatctcggactggggccatgacttccgtccggat
taccgccggatcgctgacctcatcgagcagttgccggattcggtgccggtgctggccacc
acggccacggccaactcccgcgtggtgcacgacatcgaggagcaactcggcgccggcgtc
ctgaccattcgcggcgccctcggccgagattcactgcggctaggcgtcctggcgctccct
gacgcccgccagcgccttgggtggctgctgacccatctctcggacctgcccggcagcggc
atcatctacaccctgaccgtttccgccgctgaggacaccgcccggctgttgtcggaggcg
ggccacgaagtgctgtcctacaccggccgcacagaccccgcagaccgggaacgcgccgag
cagctgctcaaggacaaccaggttaaggccctggtggctacgtccgcattgggcatgggc
ttcgacaagccggaccttggattcgtggtccacctcggggcgccgtcgtcgccggttgcc
tactaccagcaggtgggccgtgcaggccgtggagccgccaacgccgatgtcctgctgttg
ccgggctccgaggaccgggacatctggcagtacttcgccaccgcgtccatgccgtcggag
gagaaagctgccgccgtcctgactgcgctcgccgaggcgggaagtgctgtgtccaccgtg
gcgctggaagcacgggtggacctgcggcggaccccgctggagttgctgctcaaggtcctc
tccgtggatggggccgtggaacgggtaggcggaggctggcggtccaccggacggccgtgg
gtctatgacgcggagcggtaccagcgcattgccgaggcccgcgtcgatgagcaggactcc
atgatcatctaccaggacactgccgggtgccggatggaatacatcacgtccgtcctcgac
gatgagaccgcgcacgcctgcggccggtgcgacaactgcgccgggcagtggttccccgcc
gacgtcgcagccgatgccacgaacgcggccgggcagacgctcagcagggccggcggcgtc
cttgagtcgcggctgcagtggcccagcgggatggaccggctgggtgttccggtcaaggga
aaaatcaagcctccggaagcgctctcggagggccgcgtgctggccaggctgaccgacctt
ggctggggcggcgccctgcgaaccgttttcgccgccggcgcggaagaccgtccggtggac
cctgccatgctgcaggcgtgcgtccaggtcctgcgcgagtggggaacaggtgactcccgg
acggcagggtggagcggcggtggccggccggcagcgatcgtgagtatgccgtcgcgcagc
aaaccgcagctggtggaatccctcgcccgcggcatctcggacatcggccgcatcccttac
ctcggcggcctgcagttggcccacggcggccccaccggaagccggggcggcaacagtgcc
taccggttggccggcgtctgggaccgggtggtggttggcaccgaactcgaagcggcgctg
ggttccatccaggggcagagcgtgatgctgatcgatgacctggcggacagccggtggacc
cttactgtcgcgggacgtgcccttcggcaggccggggccggggctgtgcttccgctggtc
ctggcgcaggccggctga
DBGET
integrated database retrieval system
