Pseudarthrobacter chlorophenolicus: Achl_1540
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Entry
Achl_1540 CDS
T00834
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ach
Pseudarthrobacter chlorophenolicus
Pathway
ach03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ach00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Achl_1540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ach03400
]
Achl_1540
Enzymes [BR:
ach01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Achl_1540
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Achl_1540
DNA repair and recombination proteins [BR:
ach03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Achl_1540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
Cys_rich_KTR
Zn_ribbon_RRN7
Zn_ribbon_PaaD
Zn_ribbon_8
NFACT_N
zf-H2C2_2
Motif
Other DBs
NCBI-ProteinID:
ACL39528
UniProt:
B8HGG6
LinkDB
All DBs
Position
complement(1723956..1724825)
Genome browser
AA seq
289 aa
AA seq
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MPELPEVAGLATFLDGQLRGAVLTKLQVVSFAVLKTADPPFNAIEGRTVAGVRRFGKFIS
IDTEGMSLVFHLARAGWLRFTDSPADSQLKMGKGMIAVRCAFSGPDGPRGFDLTEAGTRK
SLAVYVVRDPQDVPGIAALGPDPFTEAFDAGMLAEILGASSQQIKGLLRSQSVIAGIGNA
YSDEILHAARISPFATAKSLDRETVQVLYEAIHGILGEAMAEAQGKPPKDLKDVKRSHMR
VHARTGLPCPVCGDTVREVSFADTALQYCPTCQTKGRILADRRTSKFLK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttcccgaagtggccggcctggccactttcctggacggacagctgcgtggc
gccgtcctgaccaaactgcaggttgtttccttcgctgtactcaagacggcagatcctccg
tttaacgcgattgagggccgcaccgtggccggagtccgccgctttggcaagttcatcagc
atcgacaccgagggcatgtccctggtgttccatctggcccgcgccggctggctccgcttc
acggactcccccgcggacagccagttgaaaatgggcaaagggatgattgccgtccgctgt
gctttctccgggccggacgggccgcgcgggttcgacctcacggaggccggcaccaggaag
agccttgcggtgtacgtggtgcgggatccgcaggacgtgccagggatcgccgcgctgggt
ccggatccattcacggaagcgttcgacgccggcatgctggccgagatccttggggccagt
tcccagcagatcaagggcctcctgcgcagccagagcgtcatcgccggcatcgggaacgcc
tacagcgatgaaatcctgcatgcggcccgcatctccccgtttgccaccgccaaatccctg
gaccgggaaacagtccaggtgctttacgaggccatccacggcattttgggcgaagcaatg
gccgaagcccagggcaagcccccgaaggatttgaaggacgtcaaacgcagccatatgcgc
gtccacgcccgcacggggttgccgtgcccggtctgcggggacaccgtgcgggaggtgtcg
ttcgccgacacagcgctccagtactgccccacctgccagaccaagggcaggatcctggcg
gaccgccgtacatccaagttcctgaaatag
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