Pseudarthrobacter chlorophenolicus: Achl_1649
Help
Entry
Achl_1649 CDS
T00834
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ach
Pseudarthrobacter chlorophenolicus
Brite
KEGG Orthology (KO) [BR:
ach00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ach03016
]
Achl_1649
Enzymes [BR:
ach01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Achl_1649
Transfer RNA biogenesis [BR:
ach03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Achl_1649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ACL39636
UniProt:
B8HH47
LinkDB
All DBs
Position
complement(1857914..1859245)
Genome browser
AA seq
443 aa
AA seq
DB search
MTPNNPENTTAGAPAADTAPHITVEGFDSPIPEIIELDAPREGVPLVIETQAGLERCAAA
IAAGTGPAGVDAERASGFRYGQRAFLVQIRREGAGTWLIDPEPFDDLAIINDALRGVEWI
LHAATQDLPCLSELGMWPDKLFDTELAARLAGLPRVGLAAVIEQLLGFGLAKEHSAADWS
TRPLPEPWLRYAALDVEVLSELREELVELLQADGKLEYAEQEFAAILAAGIAPPRLDPWR
KTSGLHQIRDRRQLAAVRELWLERDSLARKRDVAPGRLIPDSALVSAAKAMPSTVPQLLG
TKGFHGRAAQREAPRWLRCIAAARDLDDLPPLHLATNAPPPPRVWAERDPEAAARLATAR
PLLQERADQLNLPVENLLTPDFLRRVAWRPPAAVSEESVASELRGLGAREWQVELTAPLI
TRAFLDPQPLPPKEPKAAVTAGS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacccctaacaacccggaaaacaccacggccggcgctccggctgctgataccgcaccc
catatcaccgtggagggcttcgacagccccatccccgaaatcatcgaactcgacgcaccc
cgtgagggcgtccccctggtcatcgagacccaggccgggctggaacgctgcgcagccgcc
atcgccgcaggaaccggaccggccggtgtggacgcagagcgggcctccgggttccgctac
ggccagcgtgccttcctggtgcagatccgccgcgagggcgccggcacctggctgatcgat
cccgagccttttgacgacctcgccatcatcaacgatgccctccgcggcgtcgagtggatc
ctgcacgcggcaacccaggaccttccctgcctgtcggagctggggatgtggccggacaag
ctcttcgacacggaactggctgcccggctggcagggcttccccgcgtgggccttgccgcc
gtcatcgaacagcttctcggtttcggcctggccaaggaacactccgccgccgactggtcc
acccgccccctcccggagccgtggctccgctatgcagcactcgacgtcgaggtcctcagt
gagctgcgggaagagctggtggaactgctccaggccgacggcaagctcgagtatgccgag
caggagtttgccgcaatccttgcagcgggcatcgcgccgccccggctggacccctggcgg
aaaacgtccggcctgcaccaaatcagggaccggcgccagctggccgccgtcagggagctg
tggctggaacgcgactcgctggcccgcaagcgcgacgtcgcacccggccggctgatcccg
gactccgcactggtgtccgccgccaaagcgatgccctccaccgttccccagcttctggga
accaaaggcttccacggcagggcggcgcagcgtgaggctccgcgctggctccgatgcatc
gccgcagcccgggacctggacgatcttcccccgctgcacctggcaaccaacgccccgccc
ccgcccagggtctgggccgaacgcgaccccgaggctgcagcgaggctcgccacagccagg
ccgctgctgcaggaacgcgccgaccagctgaaccttccggtggaaaacctgctcacgccc
gactttctccgacgggttgcctggcgcccgccggctgcggtcagcgaagaatcggtggcc
tcggaactgcgcggactcggtgcgcgcgagtggcaggtggagctcacagccccgctcatc
acccgcgccttcctggacccccagccgcttccgcccaaagagccgaaggccgcggtcacc
gcgggcagctag
DBGET
integrated database retrieval system
