Pseudarthrobacter chlorophenolicus: Achl_2478
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Entry
Achl_2478 CDS
T00834
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ach
Pseudarthrobacter chlorophenolicus
Pathway
ach03420
Nucleotide excision repair
ach03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ach00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Achl_2478
03430 Mismatch repair
Achl_2478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ach03400
]
Achl_2478
Enzymes [BR:
ach01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Achl_2478
DNA repair and recombination proteins [BR:
ach03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Achl_2478
MMR (mismatch excision repair)
Other MMR factors
Achl_2478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACL40443
UniProt:
B8HBQ5
LinkDB
All DBs
Position
complement(2791199..2794702)
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AA seq
1167 aa
AA seq
DB search
MSQDVQVPADGRPTAEPADGDFPPPARFSPEELSVLLGEKNVPTAEQSAIISSPLTPRLV
IAGAGSGKTATMADRVVWLVANGWVRPEEVLGVTFTRKAAGELASRIRAKLVALQRVAAR
GAGAPMFPAGMISSDALEPKVSTYHSFASGIVSDYGLRLGVERDVVLLGGAQAWQLATEV
VEAYDGEYGHFRAAKSTLVKAVIQLAGECAEHLQEPEEVEAWLMARLADYEASPYLAGKQ
KNPPQAAADIARLLRTRASVADMVGRYTDAKRARGALDFGDLVSLAARVARDVPLAAHME
RQRYKVVLLDEFQDTSHAQLVLFSRLFGGGHAVTAVGDPNQSIYGFRGASAGQLFHFVRE
FPVRTGPAEGSAQWMPAPTSYLTTAWRNGKSILAAANVMSESLAKAEAQRGPAGGAATAA
ATVPPLQPSPFAVEGRVVLGRFASDAEEAAALADDVLKYRVTDFETKPDGSSVAPALAVL
CRRRAQMETIRRQFEARGIAYEVVGLGGLLVTPEVVDLVATLRVLADPGRSDALMRLLAG
ARWRIGPADLMALRDWSSHLARRRGQLSAGPEGDEAGDDDGTVPESDLTDGASLVEALDW
LPREGWTSSAGRCLTEVARGRLHRLSVELRQLRGYLGDDLTTLLGEVERAMLLDIEVAAL
PGVSIHQARRNLDAFQDAAAGFLRTSHRVDILAFLSWLEAAAAEENGLEAPPGDVNREAV
QLLTVHASKGLEWDAVFVPGLNAGAFPTDKDSRWSSGTAALPWPLRGDRSDLPQWDLDQP
DQKGWIDAEKDFKAAVQAHGESEERRLAYVAYTRAKHVLWVSSAAWVGSRSGRSTMSPFL
AELETLAAPAAGSPARAGVHPLSLDEAALPENSPLTLETEVAGWPYDPLEGPVDPRSGER
LRLSGGRRASMEAAAERVLAELAKGPADFRTRQDPAKSPGFAGPAAGWAREAALLLLRRS
RRSQGQDVHLPTHISASTLVDLEEDPAAVLARLRRPVPREPGMSARKGTAFHAWVEDYFG
SAGMLDLGEDPGSDDHIDAAYDLDAMVETFRASEWAHRAPAYVEVPVETRVGDVVVRGRI
DAVFRDADGRWDLVDWKTGRRPSGARLKTRAVQLAAYRLAWARLKDVPLESVRAAFFYVA
DNEVVRPHDLGTAVELEAIVAAAVASQ
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggatgtgcaggtgcccgctgacggccggccaaccgccgaacctgctgacggt
gatttcccgccgcctgcgcggttcagccctgaggaactatcggtcctgctgggtgagaag
aacgtccccaccgcggagcagtcagcaattatctcctcgccgctgacgccgcggctcgtt
attgccggggcaggatcgggcaaaacggccaccatggcggaccgtgtggtgtggctcgtg
gccaacggctgggtccggcccgaggaagtcctcggtgtgacgtttacccggaaagccgcc
ggtgagctcgcatcgaggatcagggccaagctggtggcgttgcagcgggtggcggcccgg
ggcgcaggcgccccgatgtttccggccggcatgatcagcagcgacgcccttgagcccaag
gtctccacctatcactccttcgccagcggcatcgtgtcggactacgggctccggctcggt
gtcgagcgggacgtggtccttttgggcggggcgcaggcatggcagctcgccaccgaagtc
gtcgaggcgtacgacggcgagtacggccacttccgagcggccaagtccaccctcgtgaag
gccgtcatccagctggccggcgaatgtgccgaacacctgcaggagcccgaggaggtggag
gcctggctgatggcccggctcgcagactatgaggcatcgccctacttggccgggaagcag
aagaatccgccgcaggcagccgcggacatcgcacgcctgctgaggacgcgggccagcgtg
gcggacatggtgggccgctacacggatgccaaacgggcacggggggcgctggacttcggg
gatctggtttccctggccgcccgggtggcccgcgatgttcccctggcagctcacatggag
cggcagcggtacaaggtggtgctgcttgatgagttccaggacacctcccacgcccagctg
gtcctgttctcgcgcctgttcggcggcggtcacgccgtcacggcggtgggcgatcccaac
caatccatctacggattccggggcgcctcggcagggcagctgttccacttcgtccgcgag
tttccggtccggacaggcccggccgaaggctccgcccagtggatgccggcccccacgtcg
tacctgactaccgcctggcggaacggaaagtcgatccttgccgccgccaacgtcatgtct
gaatccctggccaaagccgaagcgcagcgcggaccggccggcggcgcagccacagccgca
gccaccgtgccgccgctgcagcccagtccgtttgccgttgagggcagggtggtcctgggg
cgcttcgccagcgacgctgaagaagccgctgcgctcgcggacgatgtcctgaagtaccgg
gtcactgattttgaaaccaagccggacggatcttcggtggccccggcgctcgccgttctc
tgccggcgccgtgcccagatggaaaccatccgccggcagtttgaggcacgtggcatagca
tacgaagttgtagggctcggcgggctcctggttaccccggaagtggtggacctggtggcc
accctcagggtcctggcggaccccggcagatccgatgcgttgatgcgcctgctggccgga
gcccgctggcggattggtccggcagacctgatggcactgcgcgactggtccagccacctg
gcccgccggcgcgggcagctttcagcaggtccggagggtgatgaggccggggacgacgac
ggaacggtcccggagtctgacctgaccgacggcgcgagcctggtggaagcccttgactgg
ctgccccgcgagggctggacctcctccgccgggcggtgcctgacggaggttgcccgcggg
aggctccaccgtctgtccgtggagctccgccagcttcgcggctacctcggcgatgacctc
accaccctgctgggtgaagtggaacgggctatgctcctcgacatcgaagttgcggccctt
cccggtgtcagcatccaccaggcccggcggaacctcgatgccttccaggacgctgccgct
gggttcctgcgcacctcccacagggtggacatcctcgcgttcctttcctggctcgaagca
gcggctgctgaggaaaacggcctcgaggcgccgcccggggacgtgaacagggaagccgtc
cagctcctgacggtccacgcctccaagggactggaatgggatgcggtcttcgttccaggc
ctgaacgccggggcttttcccaccgacaaggactcacgctggagcagcggaacggctgcg
cttccgtggccgcttcgcggggaccggtccgaccttccgcagtgggacctggaccagcct
gaccagaagggctggatcgatgcggaaaaggatttcaaggcagccgtgcaggcacatggt
gagtccgaagaacgccggcttgcctacgtggcctatacccgggcgaagcatgtcctgtgg
gtgtccagcgctgcctgggtgggatcgcggtcgggtcggagcaccatgtcacccttcctt
gccgagctggaaaccctggcagcgccggcggccggatcacccgcccgcgccggtgtgcat
cccttgtcactcgatgaggcagctttgccggaaaacagccctctgacgctggaaacggaa
gtcgcgggctggccctacgatccgctggagggaccggttgatccccgttcgggagaacgg
ctccgtctctccggagggcgcagggcatccatggaagccgccgccgagcgggtgctggcc
gagctggccaaggggccggccgatttccggacccggcaggacccggccaagtcccccgga
tttgccggcccggcagccggatgggccagggaagctgcgctgctgttgctacgccgttca
cgccggtcccagggacaggacgtgcacctgccaacccatatctccgcttccaccctggtt
gatctggaagaggacccggcggccgtgcttgccaggctccgacggcccgtaccccgtgaa
ccggggatgtccgcccgcaagggaacagccttccacgcgtgggtggaggactacttcggc
tccgcgggaatgctcgatctcggcgaggaccctgggtctgatgaccacatcgatgccgcc
tacgacctcgacgccatggtggagaccttccgggcttcggagtgggcccaccgggcacct
gcctacgtggaagtgcctgtggaaacccgggtgggtgacgtggtggtgcggggtcggatc
gatgccgtgttccgtgacgccgacggacgctgggacctggtcgactggaagaccgggcgg
cggccgtccggcgcgcggctcaagacgcgggcggtgcaactcgccgcctaccggcttgcc
tgggcgcggctcaaggacgttccactggaatcggtccgggcagcgttcttctacgtggca
gacaatgaggtagtccggccccacgatcttggaacagcagtggaactcgaagcgatcgtg
gccgccgctgttgccagccagtaa
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