Pseudarthrobacter chlorophenolicus: Achl_2696
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Entry
Achl_2696 CDS
T00834
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ach
Pseudarthrobacter chlorophenolicus
Pathway
ach03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ach00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Achl_2696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ach03021
]
Achl_2696
03400 DNA repair and recombination proteins [BR:
ach03400
]
Achl_2696
Enzymes [BR:
ach01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Achl_2696
Transcription machinery [BR:
ach03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Achl_2696
DNA repair and recombination proteins [BR:
ach03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Achl_2696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF4407
Cluap1
Motif
Other DBs
NCBI-ProteinID:
ACL40661
UniProt:
B8HD15
LinkDB
All DBs
Position
complement(3017587..3021486)
Genome browser
AA seq
1299 aa
AA seq
DB search
MSSESSFGLMQIGLATAEDIRGWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEAARHEELPNLQVEHDIEKKQLIDNRDGDIAAIARDLEGE
IARLEGEGAKAADKKKARDSADRQMANVRKRADADIERLEQVWDRFKNLKVADLEGDEGL
YRELRDRYGMYFEGSMGAEAIKKRLEGFDMQAESDLLRDIIANGKGQRKTRALKRLKVVN
AFLTTNNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERYR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVTLPSQDMIIGLYHLTTKRKGSAGEGR
IFGSVSEAIMAFDARDLHLNSQVKIRLEGFVPYSGWEAPEGWEQGQPAIVETSLGQVLFN
ETLPADYPWVEAVADKGELSRIVNDLAERYPKVVTAATLDNLKDAGFYWATRSGVTVAIS
DIEVPAAKPEILAGYEERAAKIQGQYDKGLIDDDERRQELIEIWNKATNDIAAVMRESLS
PMNTINRMVSSGARGNWMQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALRTANSGYLTRRLVDVSQDVIVREEDCGTERGLVTPIAVADSNGELVLDE
NVENSAYARTLAVDVVDSEGNVLAAAGTDCGDVVIDELFKAGITEVKVRSVLTCESSVGT
CALCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAVSAGGGDDITQGLP
RIQELFEARTPKGVAPIAEAAGRITIEESERQMRLVITPDDGTEEIAYPVLRRSRLLIED
GDHVTVGQKLINGPVDPKQVLRIMGPRAAQKFLVDEVQGVYRSQGIGIHDKHVEVIVRQM
LRRVTVIESGESDLLPGELAERSRFEDANRRVVSEGKAPASGRPELMGITKASLATESWL
SAASFQETTRVLTQAAMEGKSDPLLGLKENVIIGKLIPAGTGLPRYTEVTVEPTEEAKAN
LFTGPSAFSDFSYDTLGGDGAPEFHAIPLDDYDLGNDFR
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaatcctccttcggcctcatgcagatcggcctcgccaccgcggaagacatc
cgtggctggtcttacggcgaggttaagaagccggaaaccatcaactaccgcacgctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggcccgtcccgtgactgggaatgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtcacccgcgccaaggtacgccgtgagcgcatgggccacatcgagctcgccgctccc
gtcacccacatctggtacttcaagggtgttccgtcccgcctgggctacctccttgacctg
gctccgaaggaccttgaaaaggtcatctacttcgctgcctacatgatcaccagcgttgac
gaggctgcccgccacgaggaactgcccaacctgcaggttgagcacgacatcgagaagaag
cagctcatcgacaaccgcgacggcgacatcgctgctatcgcccgcgacctcgaaggcgaa
attgcccgccttgagggcgaaggcgccaaggctgccgacaagaagaaggcccgcgattcc
gccgaccgccagatggccaacgtgcgcaagcgcgccgacgccgacatcgagcgcctcgag
caggtctgggaccgcttcaagaacctcaaggttgccgacctcgaaggcgacgagggcctg
taccgcgaactgcgtgaccgttacggcatgtacttcgaaggctccatgggcgccgaggcc
atcaagaagcgccttgagggcttcgacatgcaggccgaatccgacctgctgcgcgacatc
attgccaacggcaagggccagcgcaagacccgtgccctcaagcgcctgaaggtggtcaac
gcattcctgaccaccaacaacagcccgctcggcatggtcctcgacgccgtcccggtgatc
ccgccggaactgcgccccatggtccagctggacggtggccgcttcgcgacctccgacctc
aacgacctgtaccgccgtgtgatcaaccgcaacaaccgcctcaagcgcctgcttgacctg
ggtgctccggagatcatcgtcaacaacgagaagcgcatgcttcaggaagctgttgacagc
ctcttcgacaacggccgccgcggccgtccggtcaccggaccgggcaaccgtccgctgaag
tccctgagcgacatgctcaagggcaagcagggccgtttccgccagaacctcctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggcctgcccaagcagatggccctggagctcttcaagccgttcgtgatgaagcgcctg
gttgacctcaaccacgcacagaacatcaagtcggccaagcggatggttgagcgttaccgc
ccgcaggtgtgggacgtgctcgaagagatcatcaccgaacacccggtgctgctcaaccgt
gcacccaccctgcaccgcctgggtatccaggcgttcgaaccgcagcttgtggaaggcaag
gccatccagcttcacccgctggtttgtggtgccttcaacgctgacttcgacggtgaccag
atggcagtacacctgccgctgagccccgaggcgcaggctgaggcgcgcatcctgatgctg
tcctcgaacaacatcctgaagccgtccgatggacgcccggtcaccctgccttcgcaggat
atgatcatcggcctctaccacctgaccaccaagcggaagggttcagccggcgaaggccgc
atcttcggttcggtatccgaagccatcatggcgttcgatgcccgcgacctgcacctgaac
tcccaggtcaagatccgcctcgaaggcttcgtgccctactccggttgggaagctcccgaa
ggctgggagcagggccagcccgcaatcgtggaaacctccctgggccaggttctcttcaac
gagaccctgcccgcggactacccctgggttgaggctgtagcggacaagggcgaactgtcc
aggatcgtcaacgacctcgctgagcgctacccgaaggttgttaccgcggcaacgctggac
aacctgaaggatgccggtttctactgggccacccgttcgggcgtcacggttgccatctcc
gacatcgaggttccggctgccaagcctgagatcctcgccggttacgaggaacgcgccgcc
aagatccagggccagtacgacaagggcctgatcgacgacgacgagcgtcgccaggagctc
atcgagatctggaacaaggccaccaacgacatcgccgcggtgatgcgtgaaagcctgtcg
ccgatgaacaccatcaaccgcatggtgtcctccggtgcacgtggtaactggatgcaggtc
cgtcagatcgcgggtatccgtggcctggtggccaacccgaagggtgagatcatcccgcgc
cccatcaagtcctcctaccgtgagggcctgtcggtgctggaatacttcatcgccacgcac
ggtgcccgtaagggcctcgccgataccgccctgcgtaccgccaactcgggttacctgacc
cgacgcctggtggacgtctcgcaggacgtcatcgtccgtgaagaggactgcggcaccgag
cgtggcctggtcacgccgatcgccgtcgccgactccaacggcgagctggtcctggacgag
aacgtcgagaacagcgcttacgcacgtacgctggctgtcgacgtcgtggactccgagggc
aacgtcctcgcagctgccggcaccgactgcggcgacgtcgttatcgacgagctcttcaag
gccggcatcaccgaggtcaaggtccgttcggtccttacctgtgagtccagcgttggtacc
tgcgccctgtgctacggccgttcgctggccaccggaaagaccgtggacatcggcgaggcc
gtgggcatcatcgccgcacagtccatcggtgagcccggtacccagctgaccatgcgtacg
ttccacaccggtggtgcagtgtccgccggcggtggcgacgacatcacccagggtctgccc
cgtatccaggagctcttcgaagcccgtactccgaagggtgttgcaccgattgccgaagca
gccggccgcatcaccatcgaagagtccgagcgccagatgcgcctggtcatcaccccggat
gacggaacggaagagatcgcttacccggtcctgcgccgttcacgcctgctgatcgaagac
ggcgaccacgtcaccgttggccagaagctgatcaacggtccggtggatcccaagcaggtc
ctgcgcatcatgggtccgcgtgcagcacagaagttcctggtggacgaagtgcagggcgtg
taccgcagccagggcatcggtatccacgacaagcacgtcgaggttatcgttcgccagatg
ctgcgccgcgtcacggtcatcgagtccggcgaatcggacctgcttcccggcgagctcgcc
gagcgcagccgtttcgaggatgccaaccgccgcgttgtgtccgagggcaaggcaccggca
tccggacgtccggagctcatgggcatcaccaaggcgtcgctggccaccgagtcctggctg
tccgcagcttccttccaggagaccacccgcgtcctgacgcaggcggccatggaaggcaag
agcgatccgctgctgggcctcaaggagaacgtcatcatcggtaagctgatcccggccggc
acgggtctcccgcgctacaccgaggtcaccgtggagcccactgaagaagcgaaggccaac
ctgttcaccggccccagcgcattcagcgacttctcgtacgacaccctgggcggtgacgga
gcccccgagttccacgccatcccgctggatgactacgatctgggcaacgacttccgctaa
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integrated database retrieval system
