Pseudarthrobacter chlorophenolicus: Achl_2752
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Entry
Achl_2752 CDS
T00834
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ach
Pseudarthrobacter chlorophenolicus
Pathway
ach03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ach00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Achl_2752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ach03019
]
Achl_2752
03009 Ribosome biogenesis [BR:
ach03009
]
Achl_2752
Enzymes [BR:
ach01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Achl_2752
Messenger RNA biogenesis [BR:
ach03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Achl_2752
Ribosome biogenesis [BR:
ach03009
]
Prokaryotic type
rRNA helicases
Achl_2752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
HEM4
Motif
Other DBs
NCBI-ProteinID:
ACL40717
UniProt:
B8HD71
LinkDB
All DBs
Position
complement(3074203..3076287)
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AA seq
694 aa
AA seq
DB search
MPENQNETTDVIVEAANPATEEAAPAAAPAADAGDSTDAKAGADADENAVKFADLGIDGR
VLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLAQTGTGKTAAFAVPALSRLAELHDLNG
PSRKTQALVLAPTRELALQVAEAFTSYAKHIDDFTVLPVYGGSAYGPQLAGLRRGAQVVV
GTPGRVIDHISKGSLDLSELQYLVLDEADEMLRMGFAEDVEQIFQQTPEDRQVALFSATM
PGQIRRMSKQYLNDPAEISVKTKTSTGTNIRQRYLQIMGPQKLDAMTRILEVEEFDGVIA
FVRTKMATEDLADKLKSRGFQAAAINGDIPQQQRERTVDALKEGRIDILVATDVAARGLD
VERISHVINYDIPHDTESYVHRIGRTGRAGRNGDAILFMTPREKYLLRAIEKATRQSVEQ
MHLPTAETVNTLRLGKFAERITETLASEDVSMFRDLIASYEEEHKVPAAEIAAALAVMAQ
GGQPLLVKELAAAPDFQKRERSKDGFGSRGPSRQLTEGNATYRIAVGRRQRVMPGSIVGA
IANEGGISSAQIGGIDIRSDHSLVELPADLSPEQLRALSRTRIGGELIHLELDNGRKPSG
DRGAYQGNRGGDRGGNFKGNGGFKKEFRKNDGERSSADRGGRSYSERSERSFGSDNYSRG
QSSDSRFGGHGDGSRKPRSGGDSGHRDFNRKGKW
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaaaccagaacgaaaccaccgacgtcatcgtcgaggcagcaaaccccgccacc
gaggaagcagccccggctgccgctcccgcagctgacgccggagactccactgacgccaaa
gccggtgccgacgctgacgaaaacgccgtcaagttcgccgatctcggcatcgacggccgc
gtcctggctgccctgcaggatgttggatacgagaagccctcgcccatccaggctgccacc
atcccgctgctgctcgaaggccgcgacgttgttggcctggcgcagaccggtaccggcaag
actgcagcattcgcagtgccggcactgtcccgcctggctgaactccacgacctcaacggc
ccgtcccgcaagacccaggccctggtcctcgcccccacccgtgagctggcgctccaggtg
gccgaggccttcacctcctacgccaagcacattgacgacttcaccgtcctgcccgtgtac
ggcggctccgcgtacggaccccagctggccggcctgcgccgcggcgcccaggttgttgtg
ggtacccccggccgcgtgatcgaccacatctccaagggttccctggacctgtccgagctg
cagtacctggtgctggacgaggccgacgaaatgctgcggatgggctttgctgaagacgtg
gagcagatcttccagcagacgccggaggaccgccaggtggcgctgttctctgccaccatg
ccgggccagatccgccggatgtccaagcagtacctgaatgaccccgccgagatctcggtc
aagaccaagacttccacgggcaccaacatccgccagcgctacctgcagatcatgggcccg
cagaagctggatgccatgacccgcatcctcgaggttgaagagttcgacggcgtcatcgcc
ttcgtgcgcaccaagatggccaccgaggacctggctgacaagctgaagtcccgcggtttc
caggctgccgccatcaacggcgacatcccgcagcagcagcgcgaacgcaccgtggacgcg
ctgaaggaaggccggatcgacatcctcgtggccaccgacgtcgcggcccgcggcctggac
gtggagcgcatcagccacgtcatcaactacgacatcccgcacgacaccgagtcctacgtg
caccggatcggccgcaccggccgcgccggccgcaacggtgacgcgatcctgttcatgacg
ccccgcgagaagtacctgctgcgcgccattgaaaaggcaacccgccagtccgtggagcag
atgcacctgcccaccgcggaaacggtgaacacgcttcgcctgggcaagttcgccgagcgc
atcacggaaaccctcgcctccgaggacgtctcgatgttccgcgacctcatcgcttcctac
gaagaagagcacaaggtgccggcagcagaaatcgctgcggcactggccgtcatggcccag
ggcggacagccgctgctggtcaaggaactggctgcggctcccgacttccagaagcgcgag
cgctccaaggacggcttcggctcccgtggcccctcccgccagctgaccgagggcaacgcc
acctaccgcatcgcggtgggccgccgccagcgtgtcatgccgggttcgatcgtgggcgcc
atcgccaacgagggtggcatctcctccgcgcagatcggcggcatcgacatccgctcggac
cactccctggtggaactgcccgcggacctgagccccgagcagctgcgggcactgtcccgc
acccggatcggcggcgagctgatccacctcgaactggacaacggccgcaagccctcgggt
gaccgtggcgcctaccagggcaaccgtggtggggaccgcggcggcaacttcaagggcaat
ggcgggttcaagaaggaattccggaagaacgacggcgagcgttcgtcggcggaccgcggc
ggccgctcatacagtgagcgttccgagcgcagcttcggttcggacaactacagccgcggc
cagtccagcgattcccgcttcggcggccacggcgacggctcccgcaagccccgcagcggc
ggcgacagcggtcaccgcgacttcaaccgcaagggcaagtggtaa
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