Pseudarthrobacter chlorophenolicus: Achl_4078
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Entry
Achl_4078 CDS
T00834
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ach
Pseudarthrobacter chlorophenolicus
Pathway
ach03030
DNA replication
ach03430
Mismatch repair
ach03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ach00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Achl_4078
03430 Mismatch repair
Achl_4078
03440 Homologous recombination
Achl_4078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ach03032
]
Achl_4078
03400 DNA repair and recombination proteins [BR:
ach03400
]
Achl_4078
Enzymes [BR:
ach01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Achl_4078
DNA replication proteins [BR:
ach03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Achl_4078
DNA repair and recombination proteins [BR:
ach03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Achl_4078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ACL42029
UniProt:
B8HHY2
LinkDB
All DBs
Position
pACHL01:104963..105556
Genome browser
AA seq
197 aa
AA seq
DB search
MIPGLDFVAIDFELANAKHSSICQIGLVKVRDGVLGKTHTHFVMPPAGQQNFGHRQIAVH
GITRRMIDGADGWDLMLPRLEAFTGDLPLVAHNVVAERSMIRQTTEAIGLTPPPFTFYCT
QRAAQLHLPGQESYRLNMLVESLGLPPLQHHDAGEDAAAAAHLAVRLSELSGISDVHALF
PAMKPSPSANRASKKSD
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
gtgatcccaggattggacttcgtcgccatcgattttgagctcgccaacgccaagcactca
tccatctgccagatcggactcgtgaaggtccgcgacggggtgctcggcaagacccacacg
catttcgtgatgcccccggcaggccagcagaactttggccatcggcagattgccgtgcac
ggcatcacccggcgcatgatcgacggtgccgacggctgggacctgatgctgccacggctt
gaggccttcacaggagacctgccactggtggcccataacgtcgtcgccgagcggtccatg
atccgccagacaactgaagcgatcggcctcaccccgccgcccttcacgttctactgcacg
cagcgcgcggcgcagctgcaccttcccggccaggagtcgtaccggctcaacatgctcgtt
gagagcctcggccttccgccgctgcagcaccacgacgccggggaagacgccgccgctgca
gctcacctggccgtccgtctctcggagctgagcgggatctccgatgtgcacgcgctcttc
ccggccatgaagccatctccatcagctaacagggcatcgaaaaagtcggactga
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