Pseudarthrobacter chlorophenolicus: Achl_4431
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Entry
Achl_4431 CDS
T00834
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ach
Pseudarthrobacter chlorophenolicus
Pathway
ach03030
DNA replication
ach03430
Mismatch repair
ach03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ach00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Achl_4431
03430 Mismatch repair
Achl_4431
03440 Homologous recombination
Achl_4431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ach03032
]
Achl_4431
03400 DNA repair and recombination proteins [BR:
ach03400
]
Achl_4431
Enzymes [BR:
ach01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Achl_4431
DNA replication proteins [BR:
ach03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Achl_4431
DNA repair and recombination proteins [BR:
ach03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Achl_4431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ACL42382
UniProt:
B8HIY5
LinkDB
All DBs
Position
pACHL01:complement(368220..372425)
Genome browser
AA seq
1401 aa
AA seq
DB search
MAFVHLHNHTEHSSLDGLARIKSVAKRAAELGQTAMAITDHGSLAGAWRFTKACKAAGIK
PIIGIEIYMSIGDRFERNSEIVDRNDDTTADADDGKGDTKEKRYEHLTLLARNEQGWKNL
LALHNKAEESYWYKPRIDYKLLKEHGEGLIILSGCLAGPVAGPLSRAAATKTASEQAAAG
ALAAREANEEDEASKLDAEAQASLAKSAEFAAEARKNLDTLIDCVGKENVYLEIMYHSIE
AEQSVLKPIGQLSREYEIPMVVTNDCHYEEEGDAHHHEGFLAVGSKKGLDDPARFKFNGS
GYYVKSEAEMLDIKPGSKSWADACAMTQVIADRCDDQVIPTPHQRLPKYPLPEGFTDSNV
YLKQLVKEGAIARYGSPLSQEVKDRLKTELDIIKDMGFPDYFLIMWDVINWCRSDAPIEF
DNPDAPRKKPILVGPGRGSAAGSAVSYCLTIVGLDPLYNNLLFERFLEPGRAGMPDIDVD
FEKGRRDEVFAYLGYRWGKGNVARIGTFGVALSKAAIKDAARILKPSGPSEEIKAQAKEF
FAAGDRGKGASLLREAEKAATERATQIMRLGNKMSDLVPASGEKAYDFDQLADPKDQAGQ
AFRDLVEEAGQDALDILEMARSFEGVIKNESIHACGFVVSPEPLDDLVPLRWASHAADAD
PAAPRVICWDGPEVEDYGFLKMDILGLMNLDIVATALENIEMTTGEKLTMDDVPHPDTQG
DPKVDAAFALIAAGNTGGVFQMESAGMVKIAQDVVPESLTDISAIVALFRPGPLAAKVPD
RYAARKNGLEEVDYNQFTADKTEQEWIAKVLGDTYGVFVFQESLMRLGTVISGFDASQRS
VLRKAVGKKDAKKMAEVGEMLAAGAEQEFFDEDGAMISPKFSPKTAAHMFELMKGSASYL
FNASHSAAYAQLAFVTAYLKANWPVEYAAAILAIADKDDKRMNAFWSLKTDGITVLAPDI
NLSLARTAPVNGSVQMGLAEVKEVGVAGHYIVAERQKNGPFKNLHDVLTRVTVPGKNGAE
PTKLPVGAIQGLIEAGALDSFGPRLGLLMTLRAAHKTELLPIDAEWSDVEESTRQRQRLG
VSLGTHPLQSLKDEILAWEGPAGGKATPLHRIADENGEAVLTVGVISMWEEKGYSGGRRA
NFALESSKVTIQGVMWDRTLSNLRRRGAVPKVGDVVAVSGKVNVRTTSVGDDESEAQDTI
TTKELSIFEVWPIASATAPEINEPPAVIDFAAKYRELRASNPTPDKPKGGKDKDASAEPA
AADDSVPDNVVQLHPEQGKQPAKKATASWCAVETDEFGHGVNSDVIAGDEQVMKTHMTAQ
FPTKTVQAGSIYRVMAVGGDMITVLVTSPSLSGLQMLEIAREAGDEDPRWKKVAGPNPDY
TWYLLAEAGHAAADSQSTRAA
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgtccacctccacaaccacaccgagcacagcagcctggatggcctggcgagg
atcaagtctgtggccaaacgtgccgctgagcttgggcagaccgccatggccatcactgac
cacggctccctggcgggcgcctggaggttcacgaaagcctgcaaggccgcggggatcaag
ccgatcatcggcatcgagatctacatgtcgatcggcgaccgcttcgagcggaactccgag
atcgtggaccgcaacgacgacaccaccgccgacgccgacgacggcaagggcgacaccaag
gaaaagcgctacgagcacctgacgctcctcgcccgcaacgagcaggggtggaagaacctc
ctggccctgcacaacaaggccgaagagtcctactggtacaagccccgcatcgactacaag
ctgctcaaagagcacggcgaaggcctgatcatcctctccggctgcctcgccgggcctgtt
gccgggcctctctcccgcgctgccgcgaccaaaacggccagcgagcaggccgcggccgga
gcgctggcggcccgggaagccaacgaggaagacgaggcctccaagcttgacgccgaagct
caggccagcctggccaaatcggccgagttcgccgcggaagcgcggaagaacctggacacc
ctgatcgactgcgtcggcaaggaaaacgtctacctcgaaatcatgtaccacagcatcgaa
gccgagcagtcggtcctgaagcccatcggccagctgtcgcgcgagtacgaaatccccatg
gtcgtcacgaacgactgccactacgaggaagagggcgacgcccaccaccacgaaggcttc
ctcgccgtgggcagcaagaagggcctggacgacccggcccgcttcaagttcaacggcagc
ggctactacgtgaagtccgaggcggagatgctcgacatcaagccaggcagcaagtcctgg
gccgacgcctgcgccatgacccaggtcattgccgaccgctgcgacgaccaggtcatcccg
acgccccaccagcgtctgcccaagtacccgctgcccgagggcttcacagactccaacgtg
tacctgaagcagctggtcaaggaaggcgccatcgcccgctatggctccccgctgtcccag
gaggtcaaggaccggctcaagacggagctggacatcatcaaggacatggggttcccggac
tacttcctcatcatgtgggatgtcatcaactggtgccgctccgatgcccccatcgagttc
gacaacccggacgcgccgcggaagaagcctatcctcgtcggccccggccgcggctccgct
gcaggctcggccgtctcatactgcctgaccatcgtcggcctggacccgctgtacaacaac
ctgctgttcgagcgcttcctggagcccggccgtgccggcatgcctgacattgacgtcgac
ttcgaaaagggccgccgcgacgaagtgttcgcctacctcggctaccgctggggcaagggc
aacgtggcccgcatcggcacgttcggcgtggcactgtccaaggctgccatcaaggacgcc
gcgcgcatcctgaagccgtccggacccagcgaggaaatcaaggcccaggccaaggagttc
ttcgccgccggagaccgcggaaagggtgcctccctgctgcgcgaggccgagaaggccgcg
accgagcgggcaacccagatcatgcgactgggcaacaagatgtccgaccttgtcccggcc
tcgggtgagaaggcctacgacttcgatcagctcgccgacccgaaagaccaggccggacag
gcgttccgcgacctggtggaggaggccggtcaggacgcattggacatcctcgaaatggcc
cgctccttcgaaggcgtcatcaagaacgaatccatccacgcctgcggcttcgtggtctcc
cccgagcccctcgatgacctggttccgctgcgctgggcttcccacgcagccgacgccgac
cccgccgcgccccgtgtcatctgctgggacggtccggaggttgaggactacggcttcctg
aagatggacatcctgggcctgatgaacctcgacattgtcgccaccgcgctggaaaacatc
gagatgaccaccggcgagaagctgaccatggatgacgtcccgcacccggacacccagggc
gacccgaaggtcgatgccgcgttcgcactgatcgccgccggaaacaccggaggcgtgttc
cagatggaatccgcgggcatggtcaaaatcgcccaggacgtcgtccccgaatcgctcact
gacatttccgccatcgtcgcgctgttccgccccgggccgctggcagccaaggtcccggac
cgctacgccgcgcgtaaaaacgggctcgaagaggtcgactacaaccagttcactgccgac
aaaaccgaacaggaatggatcgccaaggtcctcggcgacacgtacggcgtgttcgtgttc
caggaatccctcatgcgcctcggcaccgtcatctccggcttcgatgcctctcagcgctcc
gtgctgcgtaaggccgtcggcaagaaggacgccaagaagatggccgaggtcggcgaaatg
ctggccgccggcgcggagcaggagttcttcgacgaggacggggccatgatctccccgaag
ttctccccgaaaacggccgcccacatgttcgagctcatgaagggctcggcgtcctacctg
ttcaacgcctcccactcggccgcgtacgcccagctggcgttcgtcaccgcctacctgaag
gccaactggccggtggaatacgccgccgcgatcctggccatcgccgacaaggacgacaag
cgcatgaacgccttctggtccctgaagaccgacggcatcacagtgctcgccccggacatc
aacctgtccctggcccgcacagctccggtgaacgggtccgttcagatgggtctcgccgag
gtcaaagaggtcggcgtcgccggacactacattgtcgccgagcggcagaagaacggcccg
ttcaagaacctgcacgacgtcctcacccgcgtcacagtgccgggcaagaacggtgccgaa
ccgaccaagctgccggtgggcgccatccagggcctgatcgaggcgggtgcgctggactcg
ttcgggccgcggctcgggctgctcatgacgctgcgcgcggcccacaagaccgagctgctg
cccatcgatgccgaatggtccgacgtggaggaatccacccggcagcgccagcgccttggc
gtcagcctcggcacccaccccttgcaatccctcaaggacgaaatcctcgcctgggagggc
ccggccggcggcaaggccaccccgctgcacaggatcgccgacgagaacggcgaagctgtg
ctcacggtgggggtcatctccatgtgggaagagaagggctactccggcgggcgccgggcc
aacttcgcgctggagtcctccaaggtcaccatccagggcgtcatgtgggatcgcaccctg
tccaacctgcgccgccgcggcgctgtccccaaggtcggtgacgttgtcgctgtttcgggc
aaggtcaacgtccgcaccacctcggtcggcgacgacgagtccgaggcccaggacaccatc
accaccaaggagctctccatttttgaagtctggccgatcgcctcggcaaccgcccccgaa
atcaacgaacctcccgccgtgatcgacttcgctgcgaagtaccgcgaactgcgcgccagc
aaccccaccccggacaaaccaaagggcggcaaggacaaggacgcgtcagctgaaccggcc
gccgccgatgacagcgtccccgacaacgtcgtgcagctgcacccggagcagggcaaacag
ccagccaagaaggccaccgcttcctggtgcgcggtcgaaaccgatgagttcggccacggc
gtgaacagcgacgtcattgccggagacgagcaggtcatgaagacccacatgacagcccag
tttccaaccaagacagtccaggccggatccatctaccgggtcatggctgtgggcggcgac
atgatcaccgtcctggtgacctcgccgtcactgagcgggctgcagatgctggagatcgca
cgggaagccggagacgaggatccgcgctggaagaaggtcgccggtcccaaccccgactac
acctggtacctgctggccgaggccgggcacgcggccgcagactcacagtccacgcgcgcc
gcctag
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