Pseudarthrobacter chlorophenolicus: Achl_4437
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Entry
Achl_4437 CDS
T00834
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03086
RNA polymerase primary sigma factor
Organism
ach
Pseudarthrobacter chlorophenolicus
Pathway
ach02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ach00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Achl_4437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ach03021
]
Achl_4437
Transcription machinery [BR:
ach03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Achl_4437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
ResIII
Sigma70_r4
Helicase_C
HA
DEAD
ERCC3_RAD25_C
Sigma70_r3
Flavi_DEAD
SWI2_SNF2
Cas3-like_C_2
Sigma70_r1_2
IstB_IS21
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ACL42388
UniProt:
B8HIZ1
LinkDB
All DBs
Position
pACHL01:377366..380221
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AA seq
951 aa
AA seq
DB search
MDRWRAAGRRGVIEAVTGAGKTRVGIASAFEAVRRGFKVLVLVPTAELQIQWLQALARDL
PGARRGALGDNRHDSLDTVDVLVAIVHSAATRQTLRDHKAGLIIADECHRYAAPMFAEAL
ETGYTWRLGLSATYERTDGEHLVRLAPFFGDIVFRLWYDRALAEKIIAPFDVAMVGVELT
PSERDEYDAFTETMAKATGPLEIYLHMPRNPFAPFIAAVAHLADSKIDSPGPALARKYMA
AMTGRQNLLAETPTKRMALAALNRAITAAGPTLVFTQTKKSALSAAQVCAAMGNPATTVM
SGMSRDQRAAALGSFRDGNAKVLTAPRVLDEGIDVPEADLGIMVAASSSQRQLVQRLGRV
IRKKIDGRAGRFVVLYSRHTVEDPAVRGDEYLGAVLPFARRQETFRIETDVEAVEAFLAY
TEHETKVPEVPEVPQAPAVEPPAAPFVLERDDSDWSEAPVLEGSIGDDVRLYLEQASSFD
LLTHEEVTDLGMAIEAGLYAEHLLGTARPEGRRAILELESVASAGRDAVLKLVSCNLRLV
VSIAKRHTGRGMDFLDLIQEGNAGLYRAVQKFDYTKGFKFSTYATWWIRQAITRGIADQS
RTIRLPVHFHEQVVSVFIAERNFLQSEGRDGTAEEIAEACGKTVDEINAVRRHRTPPASL
DWEVPNGKGGVELLGETLYDPDEPTAYDAAVLAQLQSAVHGALDRLSEREAGVLAYRFGL
ATGEQLTLDQIGTIYGVTRERIRQIEAKAFAALREPAAAAQLRDFFDGRSDLDAAGSADT
SKATTAPAAKKPTKPAKKKRRKVEAGPVVEMRKAKWDRALAKLSAFVAREGHALVPTKHV
ESGHNLGAWINTQRNALRLGTISPERLAEIDAIDISWRKGKIAPWETQQADTARQPAPEP
EPIEIAPDNEDPFAGPPVAATISLILDEDPFAESPATPGKTCLLDEEDPFA
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaccggtggcgtgccgccggccgccgcggggtcatcgaggcggtcaccggggcaggc
aagacgcgggtcggcatcgcctccgccttcgaagcagtgcggcgcggattcaaggtcttg
gttctcgtccccaccgcagagctgcagatccagtggctccaggccctggccagggacctc
ccgggggcgcggcgtggggcgttgggcgacaaccgccatgacagcctggacaccgtggac
gtcctcgtcgcgatcgttcattccgcggcaacgcgccaaaccctccgggaccacaaggcc
gggctgatcatcgcggacgaatgccaccgatacgcagccccgatgttcgcagaagccctg
gaaaccggctacacctggcgtctgggcctgtccgccacctatgaacgcaccgacggtgaa
cacctcgtccggctcgcacctttcttcggcgacatcgtcttcaggctctggtacgacagg
gcgctggcagagaagatcatcgcccctttcgacgtcgccatggtcggtgttgaactcacc
ccgtcagagcgcgacgaatacgatgcgtttacggagacgatggccaaagccaccggcccg
cttgagatctacctgcacatgcctaggaacccgttcgcgccgttcattgccgcagtcgcg
cacctggcagacagcaaaatcgactccccgggcccggccctggcccgcaaatacatggcc
gcgatgaccggccggcagaacctgctggcggagacaccgaccaagcgcatggccctggca
gccctgaaccgtgcaatcaccgccgccggaccgaccctggtgttcacccagacgaagaaa
tccgctctgtctgctgcgcaggtctgcgctgcgatgggcaaccccgccaccacggtgatg
tcgggcatgagccgcgaccagcgtgccgcggcgctgggcagcttccgggacgggaacgcc
aaagtcctcaccgcaccgcgggtactggacgagggcatcgacgttcccgaggccgatctg
ggcatcatggtcgccgccagcagcagccagcgccaactcgtccagcgtctcggccgggtc
atccggaagaagattgacggccgggccgggcgctttgtcgtcctctactccaggcacact
gtggaggaccccgcggtccggggcgacgagtaccttggcgccgtcctgccctttgcccgc
aggcaggaaacgttccggattgagaccgatgtggaggctgttgaggcgttcctcgcctac
acagaacatgaaactaaagtgccggaggtccctgaggtgccccaagctcctgcggttgaa
ccgcctgccgccccgttcgtcctcgaacgcgacgacagtgactggtccgaagcgcccgtc
cttgaaggcagcatcggcgacgacgtgcggctctatctcgaacaggccagctccttcgac
ttgttgacccatgaggaggtcacagatctggggatggcaatcgaagccggactgtacgct
gagcacctgctgggcacggcacgtcccgaagggcgccgggcgatcctcgagttggagtcc
gtcgcgtccgcgggccgcgatgcggtgctcaagctcgtgagctgcaacctgcgcctggtc
gtgtccatcgccaagcgccacaccggccgcggcatggatttcctcgacctcatccaggag
ggcaacgccgggctctaccgcgccgtccagaagttcgactacacgaagggcttcaagttc
tccacatacgcaacctggtggatccgccaggccatcacccgcggaatcgccgaccagtca
cgaacaatccggctccccgtccacttccacgagcaggtcgtcagcgtcttcatcgccgaa
cggaacttcctccaaagcgaaggacgcgacggcactgcggaggagatcgctgaggcatgc
ggcaagaccgtcgacgagatcaacgctgtccgccgccaccggaccccgccggcctcgctg
gactgggaagtgcccaacggtaagggcggcgtcgagctgctgggggagaccctctacgac
cccgacgaacccaccgcgtacgacgccgccgtgctggcacagctgcagtccgcggtgcac
ggagccctggaccggctctcggaacgggaggccggtgtcctcgcctacaggttcggactg
gccaccggggaacaactgacgcttgatcagatcggcacgatctacggggtgacccgggaa
cgcatccgtcagatcgaagcgaaagcgttcgctgcactccgtgagccagccgcagcagca
cagctcagggacttcttcgacggacgcagcgatcttgacgccgctggcagcgcagataca
tcgaaagctacgaccgcaccggccgcgaagaagccgaccaagcccgccaagaaaaagaga
aggaaagtggaagcggggcctgtcgtggaaatgcggaaagccaaatgggaccgtgcgctg
gcgaaactctcggcgttcgtagcccgggaaggccacgccctggtccccaccaaacacgtc
gaatccggccacaacctgggggcttggatcaacacccagcgcaacgcgctccgcctgggc
accatcagccccgaacggcttgctgagatcgacgcgatcgacatttcgtggcgcaaaggc
aagatcgccccgtgggaaacacagcaggccgatacggcgcggcagcccgccccggaacct
gagccgatcgaaatagcgcccgacaatgaggaccccttcgctggcccgccggtggctgcc
accatcagcctcatcctggacgaggatcctttcgctgagtctccggcaacgcccggcaaa
acgtgcctgttggacgaagaggaccccttcgcctga
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