Achromobacter sp. ES-001: KYT87_01635
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Entry
KYT87_01635 CDS
T10529
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
acha Achromobacter sp. ES-001
Brite
KEGG Orthology (KO) [BR:
acha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acha03000
]
KYT87_01635
Transcription factors [BR:
acha03000
]
Prokaryotic type
Helix-turn-helix
Other families
KYT87_01635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
HTH_8
AAA_lid_14
Sigma54_activ_2
HTH_30
AAA_5
HTH_23
HTH_29
Mg_chelatase
HTH_28
HTH_IclR
AAA_3
AAA_2
HTH_31
AAA
P22_Cro
HTH_1
AAA_16
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
QYJ21991
LinkDB
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Position
381954..383840
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AA seq
628 aa
AA seq
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MASQSRQHALTQARLLFNQQGAVPGGIVAEPILRSWRRCADLGFDMRGVRRAELMTQGEL
REAQQRNEALRRLSEPAMSYLRRQAGGSGNLVILSDAQGLVLDSDGDSGFASRASRVALM
PGAPWDEAAAGTNAIGTALVEGRPIAVHGAEHYFEPNRILTCAAVPITDSEGRTLGVLDL
SSQARDVRPDVLALVRAAVDVIEHRLFEQAYEHYAVLRLHDDPTGLGAPGEGLLAFQGDL
LIGANRRALQALGLAPTALGVYRYADVFDGELERCPDASGRVLARSGAGYHARLRQPRSR
PPQPTAPALPAAAVRPAAPSFDAATLGALARAVHLSDAGVSLLLQGETGVGKEVFAREVH
ARGKRASGPFVAVNCAALPESLIESELFGYEDGAFTGARRQGSKGLLRQAHGGVLFLDEI
GDMPLLLQSRLLRVLQTREVSPLGAARPVPVDFALVCATHRPLAHEGSDAPVRPDLYFRI
AEYTVTLEPLRARADRLELLRALWAAQGPGPVLPPSIEARLAGYSWPGNYRQLVAVLRTL
HVLAGPSGVVDVDMLPAELLQSSATSCPTQDAPTADSGAADLQSMTDTAIRDALAAHGGN
VSRAARALGVHRSTVYRRAGNLVGPRPR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcaatctcgtcagcacgcgctgacgcaagcgcgcctgctgttcaaccagcag
ggcgccgtgcccggcggcatcgttgccgagcccatcctgcggtcctggcgccgatgcgcc
gacctgggctttgacatgcgcggtgtgcggcgtgccgagctcatgacgcaaggcgaactg
cgcgaggcccagcagcgcaacgaagcgctgcgccgcttgtctgaacccgccatgtcctac
ctgcgccgccaggccggcggcagcggcaatcttgtgattctgtcggacgcccagggcctg
gtgctggatagcgacggcgatagcggttttgccagccgcgcatcgcgcgtggcgctgatg
ccgggcgcgccgtgggatgaagcggcggcgggcaccaacgccatcggaacggctttggtc
gaaggccgacccatcgccgtgcatggcgcggaacattatttcgaacccaatcgcatcctg
acctgcgcggcggtgcccatcaccgacagcgaagggcgcacgctgggcgtgctggatttg
tccagccaggcgcgcgatgtccgccccgacgtgctggcgctggtgcgcgcggccgtggac
gtcatcgaacaccgcctgtttgaacaggcttatgaacactacgcggtgctgcgtctgcac
gacgacccgaccgggctgggcgcgcccggcgaaggcttgctggcatttcagggcgatctg
ctgatcggcgcgaaccgccgtgcgttgcaggcattgggtctggctccgaccgcactgggc
gtgtatcgctacgccgacgtgttcgacggcgaactggaacgctgccccgacgcgtccggc
cgggtgctggcgcgatcgggcgccggctaccacgcgcgcttgcgtcagccgcgttcgcgg
ccgccgcagcccacggcgccggctctgcccgccgccgccgtccggccggcggcgcccagc
tttgatgccgccacgctgggtgcgctggcgcgtgcggtgcatttgtcggacgcgggcgtt
tccctattgctgcaaggcgaaaccggcgtcggcaaggaagtgttcgcccgcgaagtacac
gcgcgaggcaagcgcgcatcggggcctttcgtggcggtcaattgcgcggcgctgcccgaa
agcctgattgaatccgaactgttcggctacgaagacggcgccttcaccggggcgcgccgg
caaggcagcaagggcttgctgcgccaggcgcatggcggggtgttgttcctggatgaaatt
ggcgacatgccgctgctgctgcaatcacgcttgctgcgggtgctgcaaacgcgcgaagtg
tcgccgctgggcgcggcgcggccggtgccggtggactttgcgctggtgtgcgccacccat
cgcccgctggcgcacgaagggtccgatgcgccggtgcgcccggacctgtatttccgcatt
gccgaatatacggtcacgctggaaccgctgcgcgcccgcgccgaccgcctggaattgctg
cgcgcgttgtgggcggcgcaaggcccggggccggtgctgccaccgtcaatcgaggcccgg
ctggccgggtattcgtggccgggcaattaccggcagttggtagcggtgctgcgcaccttg
catgtgttggccggtccgtcgggcgtggtcgatgtcgacatgctgcccgccgaactgttg
cagtcatccgccacatcctgccccacgcaggacgcgcccacggcggacagcggcgcggcg
gatctgcaatcgatgaccgataccgccattcgggatgcgctggccgcgcatggcggcaac
gtcagccgagcggcgcgcgcgctgggtgtgcaccgcagcaccgtgtatcggcgcgcgggc
aatctggttgggccgcgtccgcgatag
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