Achromobacter sp. ES-001: KYT87_04410
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Entry
KYT87_04410 CDS
T10529
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acha Achromobacter sp. ES-001
Pathway
acha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KYT87_04410 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acha03019
]
KYT87_04410 (recQ)
03400 DNA repair and recombination proteins [BR:
acha03400
]
KYT87_04410 (recQ)
Enzymes [BR:
acha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KYT87_04410 (recQ)
Messenger RNA biogenesis [BR:
acha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KYT87_04410 (recQ)
DNA repair and recombination proteins [BR:
acha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KYT87_04410 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QYJ22503
LinkDB
All DBs
Position
complement(1016039..1017868)
Genome browser
AA seq
609 aa
AA seq
DB search
MSDARALGVLQRVFGYESFRGDQQAIVEQVIDGGDALVLMPTGGGKSLCYQIPSLVREGT
GIVVSPLIALMQDQVDALTELGVRAAFLNSTQDWRVARDVEQAFLAGELDLLYVAPERLL
TDRCLQLLERGRIALFAIDEAHCVSQWGHDFRPEYLGLSMLHERWPDVPRIALTATATAE
TRTEIAQRLSLDDARHFVSSFDRPNIRYRIVEKNEVRKQLLEMIRTEHQGESGVVYGLSR
ARVEETAEFLCNQGIDAMPYHAGLSPQVRAANQSRFLREDGVVMVATIAFGMGIDKPDVR
FVAHIDLPKSVEGYYQETGRAGRDGLPATAWLAYGLQDVVQQRRMIDESPGDESYRRRLG
QQLDAMLGLCETVECRRVRLLAYFGQHITACGNCDVCLEPPQAWDGTVAAQKVLSAVYRL
WKERGQRYGAGHIIDILRGKVTDRTKQHGHETLSVFGVGEDLSDTAWRGVLRQLLAQGLL
TVDNEGFGTLALTEGSRAVLKGERQLMLRRESEKKTRSGKTSSGRPKAAAIDLPAELQPV
FEALRAWRGEVAKSHGVPAYVIFHDATLREIALAQPESMDALSHISGVGARKLEAYGEEI
LQRVAKPVL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgcgcgccctgggcgtactacagcgcgttttcggttacgaatccttccgc
ggcgaccagcaagccattgtcgaacaagtgatcgacggcggcgacgcgctggtcctgatg
cccacgggcggagggaaatcgctctgttaccagattccgtcgctggtgcgtgaaggcacc
ggcattgtcgtgtcgcccctgattgcgctgatgcaggaccaggtcgacgccctgaccgaa
ttgggcgtgcgcgccgcgttcctgaactccacgcaggactggcgcgtggcccgcgacgtc
gaacaggcgtttctggccggcgagctggatctgctttacgtcgcccccgaacggctgctg
accgaccgctgcctgcaactgctggaacgcggccgcatcgccctgttcgctatcgacgaa
gcgcattgcgtgtcgcagtggggccatgatttccggccagaatacctgggcctgtccatg
ctgcacgagcgctggcccgatgtgccacgcatcgcgctgacggccacggccacggccgag
acccggaccgagatcgcccaacgcctgtcgctggacgacgcccggcacttcgtgtccagc
ttcgaccgccccaacatccgctaccgcatcgttgaaaagaacgaagtgcgcaaacagctg
ctggaaatgatccgcacggaacaccagggcgagtccggcgtggtgtacggcctgtcgcgg
gcgcgggtcgaggaaaccgccgaattcctgtgcaaccagggcattgacgccatgccgtat
cacgcggggctcagcccgcaggtgcgcgccgccaatcagtcccggttcctgcgcgaagac
ggcgtggtcatggtggccaccattgccttcggcatgggcatcgacaagcctgacgtgcgt
tttgtggcgcacatcgacctgcccaagtcggttgaaggctactaccaggaaaccggccgg
gccggccgtgatgggctgcccgccacggcgtggctggcttacggcctgcaagacgtggtg
caacagcgccgcatgatcgatgaatcccccggcgacgaatcctatcgccgtcggttgggt
caacagctggacgcgatgctgggtctgtgcgaaacggtggaatgccggcgcgtgcggctg
ctggcgtactttggccagcacattaccgcctgcggcaactgcgacgtctgcctggaaccg
ccgcaagcctgggacggcacggtggccgcgcagaaagtgctgtccgccgtttaccgcttg
tggaaagaacgcggccagcgctatggcgcgggccacatcatcgacattctgcgtggcaag
gtcaccgaccgcaccaagcagcacggccatgaaacgctaagcgtgttcggcgtgggcgaa
gaccttagcgataccgcgtggcgcggcgtgctgcgccagctgctggcgcaaggcttgttg
acggtggacaacgaaggcttcggcaccctggccctgaccgaaggcagccgcgcggtgctc
aagggcgaacgccagctgatgctgcgccgcgaatccgaaaagaagacgcggtcgggcaag
accagcagcgggcggcccaaggcagcggccatcgacctgccggccgaactgcaacccgtg
ttcgaagccctgcgcgcctggcgcggcgaagtggccaagagccacggcgtgccggcctat
gtcattttccatgacgccacgctgcgtgaaattgccctggcgcagccagagtccatggac
gcccttagccacatcagcggcgtgggcgcgcgcaagctggaagcctacggcgaagaaatc
ctgcaacgcgtggccaagccggtgctgtaa
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