Achromobacter sp. ES-001: KYT87_11690
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Entry
KYT87_11690 CDS
T10529
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
acha Achromobacter sp. ES-001
Pathway
acha03030
DNA replication
acha03430
Mismatch repair
acha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KYT87_11690 (holB)
03430 Mismatch repair
KYT87_11690 (holB)
03440 Homologous recombination
KYT87_11690 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acha03032
]
KYT87_11690 (holB)
03400 DNA repair and recombination proteins [BR:
acha03400
]
KYT87_11690 (holB)
Enzymes [BR:
acha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KYT87_11690 (holB)
DNA replication proteins [BR:
acha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KYT87_11690 (holB)
DNA repair and recombination proteins [BR:
acha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KYT87_11690 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
QYJ23817
LinkDB
All DBs
Position
2579196..2580245
Genome browser
AA seq
349 aa
AA seq
DB search
MSAPQFLPWQMETARAWLGNRDRFAHAWLVHGLAGIGKLDFAIAAAASLLCETPDNGLAC
GHCAACAWFASGNHPDLRRIRPEAVAVEEGADAAEPAEDAEPTSGAAKRAPSKEIRIDQI
RSLESWFNTATHRGGWRVALLYPAHALNVVSSNALLKVLEEPPPHTVFLLVADAPDRLLP
TLVSRCRRLPLPAPDPDTALQWLRAQNVEPAREWLAAAGGAPLAALRLAQAGDTPCPPWL
SQLINPLAQGQAPDVGTMAETLEKVPATEWIDALQRLYTDLMLASAGAPVRYFPALGAGV
AKVAARMNTARVAEAARWLTRQRALATHPLNAKLFAHATLQRVVLSCQA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgccccagttcctgccgtggcaaatggagacggcgcgtgcctggctgggcaac
cgcgaccgctttgcgcacgcctggctggtgcacggcctggccggcatcggcaagctggat
ttcgcgattgccgccgctgccagcctgctgtgcgaaacccccgataacggcctggcctgc
ggccactgcgccgcctgtgcctggtttgccagcggcaaccaccctgatctgcgccgcatc
cgccccgaggccgtggccgtggaagagggcgcggacgccgccgagcctgccgaggacgcc
gaaccgacctcgggcgcggccaagcgagccccgtccaaggaaattcgcatcgaccagatc
cggtcgctggagtcctggttcaacaccgccacgcaccggggcggatggcgcgtggcgctg
ctgtacccggcgcacgcgctgaacgtggtgtcttccaacgccttgctcaaggtgctggaa
gaaccgcctccccataccgttttcctgctggttgccgacgcgcctgaccgcctgctgccc
acgctggtatcgcgctgccggcgcttgcccttgccggcgcccgaccccgataccgcgctg
caatggctgcgcgcgcagaacgtagagccggcgcgggaatggctggcggccgcgggcggc
gcgccgctggctgcgttgcggctggcgcaggcgggcgatacgccttgcccgccgtggctg
tcgcaactgatcaaccccttggcgcaggggcaggcacctgatgtcggcacgatggccgaa
acgctggaaaaggtgccggccacggaatggatcgacgccttgcagcgcctgtatacggat
ctgatgctggccagcgccggcgcgcccgtgcggtactttccggcgttgggcgcgggcgtg
gccaaggtggccgcgcgcatgaacacggcccgcgtggccgaggcggcgcgctggctgacg
cggcagcgcgcgctggccacccacccgctgaacgccaagcttttcgcgcacgccaccctg
caacgcgtggtgctatcctgccaggcgtaa
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