Achromobacter sp. ES-001: KYT87_11830
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Entry
KYT87_11830 CDS
T10529
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
acha Achromobacter sp. ES-001
Brite
KEGG Orthology (KO) [BR:
acha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acha03009
]
KYT87_11830 (dbpA)
Enzymes [BR:
acha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KYT87_11830 (dbpA)
Ribosome biogenesis [BR:
acha03009
]
Prokaryotic type
rRNA helicases
KYT87_11830 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-ProteinID:
QYJ23844
LinkDB
All DBs
Position
complement(2605587..2606975)
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AA seq
462 aa
AA seq
DB search
MTNTPFSTLPLLPALLDNLQSLGFEQMTPIQAQSLPLILEGRDIIAQAKTGSGKTAAFGL
GVLQKLDPTRLAPQALLVCPTRELADQVAQELRRLARLIPNVKILTLCGGAPARPQAESL
ARGAHLVVGTPGRIQDHLERGSLDLAGLTTLVLDEADRMVDMGFYDDIVAIASHCPTKRQ
TLLFSATYPDNIRKLSARFLRNPAEVKVEAQHDASRIEQIFFEIDEKDRLDAVARLLAHY
RPVSTLAFCNTKVRSHDLVERLQADGISAQALNGDLEQRERDEILIQFANQSCAVLVATD
VAARGLDIQNLGAVINVDVTKDTEVHVHRIGRSGRGDQKGLALSLCSPDEMRWANLVEQY
QGSPLKWGDIKSLKPKADRPLRAPMVTLCIQGGKKDKLRPGDLLGALTGDGGLTFEQVGK
INITEFNAYVALDRQIAKQAFSRVSNSNIKGRRFRMRFLEEF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaacacgcccttttctacccttccccttctgcccgccctgcttgataacctgcaa
agcctggggtttgagcaaatgacgcctattcaggcgcaaagcctgccgctgatcctggaa
ggccgcgacatcatcgcgcaagccaagaccggcagcggcaagaccgcggcgtttggcctg
ggcgtgctgcaaaagctggaccccacccgcctggcgccgcaagcgttgctggtgtgcccc
acccgcgaattggccgaccaggttgcacaggaactgcgccgcctggcgcgcctgattccc
aacgtgaagatcttgacgctgtgcggcggcgcgcctgcccgcccccaagccgaatcgctg
gcgcgcggcgcgcatctggtggtgggcacgccgggccgtatccaggaccatctggaacgc
ggcagcctggacctggccggcctgaccacgctggtgctggacgaagccgaccgcatggtc
gacatgggcttctacgacgacatcgtggccattgcctcgcactgccccaccaagcgccag
acgctgctgttctcggccacctaccccgacaacatccgcaagctcagcgcgcggtttctg
cgcaaccccgccgaggtcaaggtcgaggcgcagcacgacgccagccgcatcgaacagatc
ttctttgaaatcgacgaaaaagaccgcctggacgccgtggcccgcctgttggcgcattac
cgccccgtgtccacgctggcgttctgcaacaccaaggtccgcagccacgacctggtggaa
cgcctgcaagccgacggcatcagcgcacaggcgctcaatggcgacctggaacagcgcgaa
cgcgacgagatcctgatccagttcgccaaccagagctgcgccgtgctggtggcgaccgac
gtggcggcccgtggcctggacatccagaatctgggcgccgtcatcaacgtggacgtcacc
aaggacaccgaagtgcacgtgcaccgcatcggccgcagcggccggggcgatcagaagggt
ttggcgctaagcctgtgttcgcccgacgagatgcgctgggccaacctggttgagcaatac
cagggctcgcccttgaagtggggcgacatcaaatcgctgaaacccaaggccgaccgcccc
ttgcgcgcgcccatggtcacgctgtgcatccagggcggcaagaaagacaagctgcgcccg
ggcgacctgctgggcgccctgacgggcgacggcgggctgacgtttgaacaggtgggcaag
atcaacatcacggaattcaacgcctacgtggcgctggaccgccagattgccaagcaggcg
ttttcgcgcgtgtccaacagcaacatcaagggccggcgcttccgtatgcgctttcttgag
gaattctga
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