KEGG   Achromobacter sp. ES-001: KYT87_14065
Entry
KYT87_14065       CDS       T10529                                 
Name
(GenBank) DNA topoisomerase IB
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
acha  Achromobacter sp. ES-001
Brite
KEGG Orthology (KO) [BR:acha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acha03032]
    KYT87_14065
   03400 DNA repair and recombination proteins [BR:acha03400]
    KYT87_14065
Enzymes [BR:acha01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     KYT87_14065
DNA replication proteins [BR:acha03032]
 Prokaryotic type
  DNA Topoisomerases
   KYT87_14065
DNA repair and recombination proteins [BR:acha03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      KYT87_14065
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: QYJ24245
LinkDB
Position
complement(3107304..3108389)
AA seq 361 aa
MDTRSNPLAEPAPGAGDPPLVYVDDTQPGYRRVRVNGSTFHYLDTHGKRITDEAEIKRIH
KLVIPPAYEDVWICPLPHGHLQATGRDARGRKQYRYHPAWAALRDAGKYQNLLAFGQALP
RIRRRVARDMKERGLTQNKVIATLVRLLETTLIRIGAREYARSNKSYGLTTLTRRHATVA
GSSFRFRFVGKSGVPHDVTVRDRRVARIIKRCMEIPGQQLFQYLDEDGAKHPVDSGAVNA
YLRQAGEGDFTAKHYRTWAGSAMAYAALQAHPFETATQARQTVAEVIKQVSKRLANTPAV
CRACYVHPALLEAYLEGRLPPKSRAPDGPRGLHADERRLLEFLRKLPPMDAPAPPMPSEE
V
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggacacccgcagcaacccgcttgccgagccggcccccggcgctggcgacccacccttg
gtctacgtggatgacacccagcccggctaccggcgggtacgcgtcaacggcagcaccttt
cattaccttgatacccacggcaagcgcatcacggacgaggccgagatcaagcgcattcac
aagctggtgatcccgcccgcgtacgaagatgtgtggatctgccccctgccccacgggcat
ttgcaggccaccgggcgcgacgcccgtggccgtaaacaataccggtatcaccccgcctgg
gcggcactgcgcgatgcgggcaagtaccagaacctgctggccttcggacaggcgctgccg
cgcatccggcggcgcgtggcgcgcgacatgaaggaacgcggcctgacgcagaacaaggtc
atcgccaccttggtacgcttgctggaaaccacactgatacgcatcggcgcccgggaatac
gcgcggtcaaacaagtcttatggcttgacgacgctgacgcgccgccacgccaccgtggcc
ggcagcagctttcgttttcgcttcgtgggtaaaagcggcgtgccgcacgacgtgacggta
cgcgaccgccgcgtcgcgcgcatcatcaaacgctgcatggagattcccggccagcagctg
ttccagtatctggatgaagacggcgccaagcaccccgtggattccggcgcggtgaacgcg
tatctgcgccaagcgggtgaaggcgacttcacggccaagcattaccgcacgtgggcgggg
tccgcgatggcctacgcggcattgcaggcgcaccccttcgagaccgcgacgcaagcgcgt
caaacggttgccgaggtcatcaagcaggtgtcgaagcggctggccaacacgcccgccgta
tgccgcgcctgctatgtgcacccggcgttgcttgaggcctatctggagggccggctgccg
cccaagtcacgcgcgccggatggcccgcgcgggctgcatgcggatgaacggcgcctgctt
gaattcctacgcaagctgccgcccatggacgcgcccgcgccgcccatgccttcagaagag
gtgtga

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