Achromobacter sp. ES-001: KYT87_28605
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Entry
KYT87_28605 CDS
T10529
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
acha Achromobacter sp. ES-001
Pathway
acha00300
Lysine biosynthesis
acha00470
D-Amino acid metabolism
acha01100
Metabolic pathways
acha01110
Biosynthesis of secondary metabolites
acha01120
Microbial metabolism in diverse environments
acha01230
Biosynthesis of amino acids
Module
acha_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
acha00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KYT87_28605 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KYT87_28605 (dapF)
Enzymes [BR:
acha01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KYT87_28605 (dapF)
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Paralog
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QYJ21496
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Position
6324260..6325171
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AA seq
303 aa
AA seq
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MGDNRPMNWNFTKMHGAGNDFVVLDGVRQTIEMTPERARALGDRHFGIGADQILLVERAT
RPDADFRYRIFNSDGSEVEHCGNGARCFVRFVHEQGLSDRNPLRAEIATGILVLDEGDDE
QVTVDMGSTRFEPEALPFDTAGLPSTREGEDTLWELELDAPAGVPNKVWLSAVAISNPHA
VQVVDNVDTAPVSVQGPLIETHPRFARRVNAGFLQVMDRHNVRLRVFERGAGETLACGTG
ACAAVAAGIRRGLLESPVRVQTRGGVLTVAWNGDQLRMTGPAESVFTGQVDIDKLVFSMA
LNR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgggcgataatcgcccgatgaactggaacttcaccaaaatgcatggcgcgggcaacgac
tttgtcgtgctcgacggggtccgccagaccatcgaaatgacgcccgagcgtgcccgagcg
ctgggcgatcggcacttcggcatcggcgccgaccagatcctgctggtcgagcgggccacc
cgccccgacgcggatttccgctatcgcattttcaattccgacggcagcgaagtcgaacac
tgcggcaacggcgcgcgctgttttgtgcgcttcgtgcacgaacaagggctgtccgaccgt
aacccgctgcgcgcggaaatcgccaccggcatcctggtgctggacgaaggcgacgacgaa
caagtcacggtagatatgggcagcacccggttcgaacccgaggccctgccattcgacacc
gccggcctgccttcaacgcgcgaaggcgaagacaccctctgggaacttgaactggacgcc
cccgctggcgtgcccaacaaagtgtggctgtcggccgtggccatctcgaacccgcacgcg
gttcaggtggtggataacgtcgacaccgcgcccgtttccgttcaaggcccgctgatcgaa
acccacccgcgctttgcccgccgcgtgaatgcgggctttctgcaagtcatggaccgccac
aacgtccgcctgcgcgttttcgagcgcggcgcgggcgaaacgctggcctgcggcacgggc
gcctgcgccgccgtggcagccggcatccgccgtggcctgctggaatcgccggtgcgcgtg
caaacgcgcggcggcgtactgaccgtggcctggaatggcgaccaactgcgcatgaccggc
ccggccgaatccgtgttcacggggcaagtcgacatcgacaagctcgtcttctccatggcg
ctgaaccgctga
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