Achromobacter sp. B7: DVB37_01185
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Entry
DVB37_01185 CDS
T05703
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
achb
Achromobacter sp. B7
Pathway
achb00040
Pentose and glucuronate interconversions
achb01100
Metabolic pathways
achb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
achb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DVB37_01185
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DVB37_01185
Enzymes [BR:
achb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
DVB37_01185
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GFIT
Motif
Pfam:
Pectate_lyase_4
RANK_CRD_2
Motif
Other DBs
NCBI-ProteinID:
AYD62660
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Position
252305..253513
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AA seq
402 aa
AA seq
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MKSAMKTMRWLLAVALLQGGVAAANEACPSPDEHCPLVSSLLSQREGYGAKATGGLGGKF
IEVTSDQDSGPGTLRAALAQAKKGPTWIRFASDMTIVLDKQLRVPSNVTIDGRGKRVALI
DDGLGVYGVQNVILTHLTIDGRLNRLTQAVNVANGSRDVWVDHMDLSRMSDRLLNVKNGS
TDVTISWTKFHNSNKVMLLNNITSKNLFQNYERDSIARVTLHHNYFFNTVQRNPRGQFGT
FHLFNNLLEDWDFYGMSFSLEAKALVEGNIFNNTAQRKCVEPEFFPTVEGVNVNYCHYIP
IAAKRSALDNGESDRGAYEKLKSQHGYTRDYKAFLRLKDNLYLGDAKPVLQDYRPDAAPT
PPYCYGYEHPTPELADKIRKFAGNTGGDTPLPASRTGSGCGG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgcaatgaaaacgatgcgttggctgcttgccgtggccctgctgcaaggcggg
gtggcggccgcgaatgaagcctgccccagcccggacgaacactgcccgctcgtttcatcg
ctgctgtctcaacgcgaaggctacggcgccaaggctacgggcggcctgggcggcaagttc
atcgaggtgacgtccgaccaggattcggggccgggcaccttgcgcgccgcgctggcgcaa
gccaagaaggggccgacctggatccgcttcgcatccgatatgacgatcgtgctggacaag
cagctgcgcgtgccctcgaacgtgacgatcgacgggcgcggcaagcgcgttgccttgatc
gacgacgggctgggcgtgtacggcgtgcagaacgtcatcctgacgcacctgaccatcgac
ggccgcctgaaccggctgacgcaggccgtgaacgtggccaatggcagccgcgatgtgtgg
gtggaccatatggatctgtcgcgcatgtcggaccggctgctgaacgtgaagaacgggtcc
accgacgtgacgatttcatggaccaagttccataactcgaacaaggtcatgctgctgaac
aacatcacgtccaagaacctgttccagaactacgaacgtgattcgatcgcccgcgtgacg
ctgcatcacaactatttcttcaacaccgtgcagcgcaatccgcgcgggcagttcggcacg
ttccacctgttcaacaacctgcttgaagactgggatttctacggcatgagcttcagcctg
gaagccaaggcgctggtcgaaggcaacatcttcaacaacacggcgcagcgcaagtgcgtc
gagcccgaattctttcccacggtggaaggcgtcaacgtcaattactgccactacattccc
attgccgccaaacgcagcgcgctggacaacggcgagtcggatcgcggcgcgtacgagaaa
ctgaagtcgcagcacggctacacgcgcgactacaaagccttcctgcgcctgaaagacaac
ctgtacctgggcgatgccaagccggtgttgcaggactaccgacccgatgccgcgccgacg
ccgccgtattgttacggctacgagcacccgacgccggaattggcagacaagatccgcaag
tttgccggcaacaccggtggcgatacgcccctgcctgcatcaagaaccggctccggctgc
ggcggctag
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