Achromobacter sp. B7: DVB37_02600
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Entry
DVB37_02600 CDS
T05703
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
achb
Achromobacter sp. B7
Brite
KEGG Orthology (KO) [BR:
achb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
achb03016
]
DVB37_02600
Enzymes [BR:
achb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DVB37_02600
Transfer RNA biogenesis [BR:
achb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DVB37_02600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
DUF7691
RNase_P-MRP_p29
Motif
Other DBs
NCBI-ProteinID:
AYD62913
LinkDB
All DBs
Position
complement(569074..570975)
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AA seq
633 aa
AA seq
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MYVFYEDDGSFKAGNILSETDASLQVESESGKRSKIKRANTLFNFASPEPAALMSQAAAA
ADELDLQFLWECAPQEEFDTPTLAADYFGHAPTPVEHAALLMRLHSAPAYFHRRGKGRYR
PAPPDILAAALAALEKKQRQAEQQQEWVDEMAAGRLPEPIAQVAETLLIRPDKNSQQWKA
LDAACAKLGKSPDRLLLELGAWPHALALHKRRFLAVNFPRGLEFPELELPPIDRELPLSD
AEIYSVDDVTTTEIDDALSVTTLPDGRLRVGVHVAAPGLTVTRDSEFDKLARARLSTVYM
PGDKIPMQPDNVIKAFSLDAGREVPVLSLYVVADPETGEIIESDTRLERVVVRENLRHNM
LDAQVTEASLADPSADIPYGHWLRPLWKLAQALSAQRENVRGKPENNSRVEYSFYLDGNP
DDPDTPVRLVPRQRNAPLDRMVAEYMILANNLWGGLLHQHGVPGIYRSQQAGRVRMSTQA
LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIAAVEHGVSARLVAPFKPRDADLFAIIGAF
DAQYAAWAEFQSAMERYWCLRWLKQNGITRTVAHVLRDDLVRFANAPLVTRVGGMPELER
GTPVEIDILGMDELALELDCRYVGQLAPEPAST
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgttttacgaagatgacggcagcttcaaggccggcaacatcctgtccgaaacc
gacgccagcttgcaggtggagtcagagtcgggcaagcgcagcaagatcaagcgcgccaat
accctgttcaatttcgcgtcgcccgaaccggcggcgctgatgagccaggcggccgcggcc
gccgacgaactggatctgcaattcctgtgggaatgcgcgccgcaagaagagttcgacacg
cccacgctggccgccgactacttcggccacgcccccacgccggtggaacatgccgccctg
ctgatgcgcctgcacagtgcgcccgcgtactttcaccgccgtggcaagggccgttaccgc
cctgccccgccggacatcctggccgctgcgctggcggcgctggaaaagaagcagcgccag
gccgagcagcaacaggaatgggtcgacgagatggccgccggccgcctgcccgaacccatt
gcccaggttgccgaaacgctgctgatccgcccggacaagaattcgcagcaatggaaggcg
ctggacgccgcctgcgccaagctgggcaaaagccccgaccgcctgctgctggaactgggc
gcatggccgcacgcgctggcgttgcacaagcgccgcttcctggccgtcaacttcccgcgc
ggcctggaattcccggaactggaactgccgcccatcgaccgagaactgccgttgtccgat
gccgagatctattcggtggacgacgtcaccacgaccgagatcgacgacgcgctgtccgtc
acgacgttgcccgacggccgcctgcgcgtgggcgtgcacgtggccgcccccggcctgacc
gtgacccgcgacagcgaattcgacaagctggcgcgcgcccgcctgtccacggtgtacatg
ccgggcgacaagatcccgatgcagccggacaacgtcatcaaggcgttctcgctggatgcc
gggcgcgaagtgccggtgctgtcgctgtatgtggtggccgacccggaaacgggcgaaatc
atcgaatccgacacgcgcctggaacgggtggtggtgcgtgaaaacctgcgccacaacatg
ctggacgcgcaagtcaccgaggccagcctggccgacccgtcggccgacattccctacggc
cattggttgcgtccgctgtggaagctggcgcaggcgctgtcggcgcaacgcgaaaacgtg
cgcggcaagcccgaaaacaattcccgcgtggaatacagcttctacctggacggcaacccc
gacgacccggacacgccggtgcgcctggtgccgcgtcagcgcaacgcgccgctggaccgc
atggtggccgaatacatgatcctggccaacaacctgtggggcggcttgctgcaccaacac
ggcgtgccgggcatttatcggtcgcaacaggcgggccgcgtgcgcatgagcacgcaggcc
ttgccgcacgaagctatcggcgtgccgcagtatgcgtggagcacgtcgccgctgcgccgc
tatgtcgacctggtcaaccagtggcaactgatcgccgcggtggaacacggcgtatcggcg
cgtctggtggcgccgttcaagccgcgcgacgccgacctgttcgccatcatcggcgcgttc
gatgcgcagtacgcggcctgggccgaattccaaagcgccatggaacgctactggtgcctg
cgctggttgaagcaaaacggcatcacccgcacggtggcgcacgtgctgcgcgatgatctg
gtgcgatttgccaacgcgccgctggtgacgcgcgtgggcggcatgcccgaactggaacgc
ggcacgccggttgaaatcgacatcctgggcatggatgaactggcgctggaactggactgc
cggtatgtcggccagctggctcccgagcccgcaagcacgtag
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