Achromobacter sp. B7: DVB37_02955
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Entry
DVB37_02955 CDS
T05703
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
achb
Achromobacter sp. B7
Brite
KEGG Orthology (KO) [BR:
achb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
achb01011
]
DVB37_02955
Enzymes [BR:
achb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DVB37_02955
Peptidoglycan biosynthesis and degradation proteins [BR:
achb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DVB37_02955
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
AYD62981
LinkDB
All DBs
Position
complement(647120..648538)
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AA seq
472 aa
AA seq
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MNLSRLLLPLMLAVLAGCAGTKAPDSKNLTTNSQGRYIARDTSRTVDLTNPPSDAWDRIR
RGFAIPNLNTDLSQQWTDYYASHPEAVQRMAERAGKYLYFIVDEINRRGLPTELALLPFV
ESAYNPTALSRAQASGLWQFVPATGTHFNLKQDWWRDERRDPIASTNAALDYLEKLFEMQ
GDWYLALASYNWGEGSVQRAMAKNEAAGLNTDYLSLNMPDETRNYVPKLQAIKNIIADPQ
RYAVALPPVGNTPYFVTVQKNSDIDLEIAAKLAEMPLDEFKALNPSFNRPVIRGDHGPTL
LLPADRVEIFNANLTNYKGDLSAWKIYHSRRGESYASIAKRFGVTEAKLRETNDIGSRQK
SASGQALLVPGEPGTGGVQLASLAAPVGALEQAPTDTKAAAPRGRAAPAPAARVASARPN
VRTHKVRPGDTLFSLAKQYGTSVDALRALNNLKGSALKVGTALRVPGTNARG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaatctatcccgactccttctgccgctcatgttggcagtcctcgccggttgcgcagga
acgaaagcccccgatagcaagaacctcaccaccaattcccaagggcgttacatcgcccgg
gatacgtccagaacggtcgacctgaccaacccgcccagcgacgcctgggaccgcatccgc
cgcggtttcgccatccccaacctgaataccgacctctcgcagcagtggaccgactattac
gcgtcccaccccgaggcggttcagcgcatggccgagcgcgcgggcaagtacctgtacttc
atcgtcgacgaaatcaaccgccgcggcctgcccaccgaactggcgttgctgcccttcgtg
gaaagcgcctacaaccccactgccctgtcgcgcgcccaggcttccggcctgtggcagttc
gtgccggccaccggcacgcacttcaacttgaagcaggattggtggcgcgacgaacgccgc
gaccccatcgcgtcaaccaacgccgcgctggactatcttgaaaagctgttcgagatgcag
ggcgactggtatctggccctggcgtcctacaactggggcgaaggctcggtgcaacgcgcc
atggccaagaacgaagcggccggcctgaacacggactacctgtccctgaacatgcccgac
gaaacgcgcaactacgtgcccaagttgcaggccatcaagaacatcattgccgacccgcaa
cgctacgcggtggcgctgcccccggtgggcaacacgccctacttcgtgacggtgcaaaag
aacagcgacatcgatcttgaaatcgccgccaagctggccgaaatgccgctggacgaattc
aaggcattgaatccgtcgttcaaccgcccggtcatccgtggcgaccacggccccacgctg
ttgctgccggccgaccgcgtcgaaatcttcaacgcgaacctgacgaactacaagggcgac
ctgtccgcctggaagatctaccattcgcgccgtggtgagtcctacgcgtccatcgccaag
cgtttcggcgtgaccgaggccaagctgcgcgaaaccaacgacatcggctcgcgccagaag
tccgcctcgggccaggcgctgctggtgcccggcgagcccggcaccggtggcgtgcagctg
gcatccctggccgcccccgtgggcgcgctggaacaggcccccaccgacaccaaggccgcc
gcgccgcgtggccgtgccgccccggcacccgccgcccgcgtagccagcgcccggcccaat
gtgcgcacccacaaggtccgcccgggcgacacgctgttctcgctggccaagcagtacggc
acatcggtggacgccctgcgtgcgctgaacaacctgaagggcagcgcgctcaaggtcggt
accgccttgcgcgtgccgggcacgaacgcccgcggctga
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