Achromobacter sp. B7: DVB37_04020
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Entry
DVB37_04020 CDS
T05703
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
achb
Achromobacter sp. B7
Pathway
achb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
achb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVB37_04020 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achb03019
]
DVB37_04020 (pcnB)
Enzymes [BR:
achb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
DVB37_04020 (pcnB)
Messenger RNA biogenesis [BR:
achb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DVB37_04020 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AYD63167
LinkDB
All DBs
Position
complement(897781..899172)
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AA seq
463 aa
AA seq
DB search
MITETIKKFVGRLFAPAPRGPLRIGRDKHGIDRRNVSRHAIKVCEVLRQHGYEGYIVGGA
VRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPAS
EEQETDEHGRILRDNVFGSQEEDAKRRDFTMNALYYDPHTEEVIDYHNGVADLKKRQVRI
IGDPVKRYREDPVRMLRAVRFAAKLNGTIDPATREPISTMAELIENVPASRLFDEMLKLL
TCGHAMDCLRQLRADGLHNGLLPLLDVVLEQPGGEHFVELALERTDARVRAGKTVSPSFL
FAALLWQQVDVRWKQLRAQGEHTIPALSQAADSVLDEQTEKLAIQRRFSSDMREIWFMQP
RFERRMGKTIFRMIEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANADDVTRADMIEE
VARLPREAGDGGMGGMGGPAASTGTRKRRRPRRSPSRGPATPE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgatcactgaaaccataaaaaaattcgtcggccgcttgttcgcgccggcaccccggggg
ccgttgcgcattgggcgcgacaagcacggcattgatcgccgtaacgtttctcgccacgcc
atcaaggtctgcgaagtcttgcgccagcacggctacgaaggctatatcgtgggcggcgcg
gtgcgtgacctgatcgtcggactggaacccaaggatttcgacgtggccaccaacgccacg
cccgaacagatccgcccgctgttccgccgcgcgcgcatcatcggccgccgctttcagctg
gtgcacgtggtgtttggccaggaaatcatcgaaacctccaccttccgcgccccggcgtcc
gaagagcaggaaaccgatgagcacggccgcatcctgcgcgacaacgtgttcgggtcacaa
gaagaagacgccaagcgccgcgacttcaccatgaacgcgctgtactacgacccgcacacc
gaggaagtcatcgactaccacaacggtgtggccgacctgaaaaaacgccaggttcgcatc
atcggcgacccggtcaagcgttaccgcgaagacccggtgcgcatgctgcgcgccgtgcgt
ttcgccgccaagctcaacggcacgatcgaccccgccacgcgcgagcccatcagcaccatg
gccgagctcatcgaaaacgtgccggcctcgcgcctgttcgacgaaatgctcaagctgttg
acctgcggccacgccatggactgcctgcgccagctgcgcgccgacggcctgcacaacggc
ctgctgcccttgctggacgtggtgctggagcagcccggtggcgaacacttcgtggagctg
gcgctggaacgcaccgacgcccgcgtgcgcgccggcaagaccgtgagccccagcttcctg
tttgccgcgctgctgtggcagcaggtggatgtgcgctggaagcagctgcgcgcgcagggc
gaacacaccatacccgcgctgtcccaggcagccgattcggtgctggacgaacagacggaa
aagctggccatccagcgtcgcttctcgtccgacatgcgcgagatctggttcatgcagccg
cgtttcgagcgccgcatgggcaagacgattttccgcatgatcgaacaaccgcgcttccgc
gccgcctgcgacttcctgcaattgcgcgccgctgccggcgaattcgacagcgtgttggca
cagtggtggatggacctggccaatgccgacgacgtgacgcgcgccgacatgatcgaggaa
gtggcgcgcctgccgcgcgaggcgggtgatggcggcatgggcggcatgggcggccccgct
gcgtcgaccggcacgcgcaagcgccggcgtccgcgccgttcgccgtcgcgcggcccggcc
acccccgagtaa
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