Achromobacter sp. B7: DVB37_04620
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Entry
DVB37_04620 CDS
T05703
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
achb
Achromobacter sp. B7
Pathway
achb00260
Glycine, serine and threonine metabolism
achb00460
Cyanoamino acid metabolism
achb00630
Glyoxylate and dicarboxylate metabolism
achb00670
One carbon pool by folate
achb00680
Methane metabolism
achb01100
Metabolic pathways
achb01110
Biosynthesis of secondary metabolites
achb01120
Microbial metabolism in diverse environments
achb01200
Carbon metabolism
achb01230
Biosynthesis of amino acids
achb01240
Biosynthesis of cofactors
achb04981
Folate transport and metabolism
Module
achb_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
achb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DVB37_04620
09102 Energy metabolism
00680 Methane metabolism
DVB37_04620
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DVB37_04620
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DVB37_04620
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DVB37_04620
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DVB37_04620
Enzymes [BR:
achb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DVB37_04620
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AYD63270
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Position
1029007..1030284
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AA seq
425 aa
AA seq
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MFQSSSPFFSSPLDKRDPVVMAMQDRELRRQQTQIELIASENLVSRAVLQAQGSVLTNKY
AEGYVGRRYYGGCDHVDEVESLALLRVRELFHADYANVQPHSGAQANGAVMLALLEPGDT
VLGMSLDAGGHLTHGARPAMSGKWFNAVQYGVRREDSLIDYDEVRRLALEHRPKLIIAGF
SAYPRQPDFARFRQIADEAGAMLMVDMAHIAGLVAAGRHPSPVPHAHVVTSTTHKTLRGP
RGGFILTNDGAIAKKINSAVFPGLQGGPLMHVVAAKAVAFGEALHTDFKRYIDRVLANAD
VLGDVLREGGIDLVSGGTDNHLLLLDLRSKGLTGAHVERTLERAGITCNKNGIPFDTQKP
SVTSGIRLGTPAATSRGFGEDEFRAVGEMIVHVVDMLATSPDEHEATERRIRAEVHALCQ
RHPIY
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttccagtcttcatccccgttcttctcatcgccgctcgacaagcgcgatcccgtcgtg
atggccatgcaggaccgggaactgcgccgccagcaaacccagatcgagctgatcgcgtcc
gaaaacctggtgtcgcgcgccgtgttgcaagcgcagggttcggtgctgaccaacaagtac
gccgaaggctacgtcggccggcgctattacggtggctgcgaccacgtggacgaggtcgag
tcgctggcgctgctgcgcgtacgcgaactgtttcacgccgactacgccaacgtgcagccg
cactccggcgcgcaggccaacggcgcggtgatgctggcgctgctggaacccggcgacacc
gtgctgggcatgtcgctggatgccggcgggcacctgactcacggcgcacggccggcaatg
tcgggcaagtggttcaacgcggtgcagtacggcgtgcgccgggaagacagcctgatcgat
tacgacgaggtccggcgactggcgctggagcatcggcccaagctcatcatcgcggggttt
tcagcctaccccaggcagccggactttgcccgctttcgccagatcgccgacgaggccggc
gccatgctgatggtcgacatggcgcatatcgcgggcctggtggcggcgggcaggcacccc
agcccggtgccgcacgcgcacgtcgtcacgtccaccacgcacaagaccctgcgcggcccg
cgcggcggcttcatcctgaccaatgacggcgccatcgccaagaagatcaattccgccgtg
tttcccggcttgcagggcggacccctgatgcacgtggtggcggccaaggcggtggccttc
ggcgaggcgctgcatacggacttcaaacgctacatcgaccgcgtgctggcaaacgccgac
gtgctgggcgacgtgctgcgtgaaggcggcatcgacctggtttccggcggcaccgacaac
cacctgctgctgctcgacctgcgttccaaggggctgaccggcgcacatgtggagcgcacg
ctggaacgcgccggcatcacgtgcaacaagaacggcattccgttcgacacgcaaaagccg
tcggtcacttccggcatccggctgggcacgccggccgccacctcgcgcgggtttggcgag
gacgagtttcgcgccgtgggcgaaatgatcgtgcatgtcgtggacatgctggccaccagc
cccgacgaacacgaagcaaccgaacgacgcattcgagctgaagtccacgcgctgtgccag
cgccatcccatctactaa
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