Achromobacter sp. B7: DVB37_07120
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Entry
DVB37_07120 CDS
T05703
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
achb
Achromobacter sp. B7
Brite
KEGG Orthology (KO) [BR:
achb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
achb03009
]
DVB37_07120
Enzymes [BR:
achb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DVB37_07120
Ribosome biogenesis [BR:
achb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DVB37_07120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AYD63718
LinkDB
All DBs
Position
1585229..1587103
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AA seq
624 aa
AA seq
DB search
MKFGAVPVTTNTAMQDDNPRSDDAVSNGQPDASAAREPSAEGDAGARGRGRKLRTPFRRR
RGDAAAEQAPAEGQSVAAAAPVESADSRGGEQEAEQALSYLDNTDRMEQRLGKYLNSDSV
MPKLHKVLADAGIGSRREMEELIVAGRVSVNGEPAHIGQRVAPNDQVRVNGKPIMRTNTK
KPPRVILYHKPAGEIVSHDDPAGRASVFARLPKLRTGKWLSVGRLDLNTEGLLIFTTSGD
MANRIMHPRYGTEREYAVRVLGEMDEAQRQSLVDGIELEDGVAAFGALDYLGGDGSNRWY
RVTLQEGRNREVRRMFEAVGVTVSRLIRTRFGDVVLPRTLRRGRWEELDGSLVTALMVQL
GLLRDDDESGGNRRRSKQPVSHDSALPPGFGTMDRNGMNGARIGRRGKLQGGRLGSAGQT
AACPSDPFGTGLMIAGGYANGHPLASEGPGGNRKGGKPGGERSAAAGGGRPGGKQGGKPG
GKPGGKPRGPRGPRAAAADGQRGNVASADVGAGNVAEAPVGGGRKPSGGKPGGKPAGARG
ANGGRSGNGKPAGAGGRGGNKAEGSRNAGGSAANKGPGAGGKPRAPRSASSASSGPRGDD
WQPRGASAHESRLGVMGGRGRQGR
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattcggagctgtcccagtgacaacgaatacagcaatgcaggacgacaatccccgt
tcggatgacgccgtttccaacggtcagccggacgcctccgccgcgcgcgaaccctctgct
gaaggcgatgccggcgcgcgtgggcgcggtcgcaagctgaggacgccgttccgccgtcgc
cgtggcgacgccgccgcagagcaggcacccgctgagggccagtccgttgcggccgcggca
ccggttgagtcggctgactcccggggtggtgagcaggaagcggagcaagcgttgtcgtat
ctcgacaacaccgatcgcatggaacagcgcctgggcaagtacctgaacagcgattcggtc
atgcccaagctgcacaaggtgctggcggacgccggcatcggctcgcgccgcgagatggaa
gagttgatcgttgccggtcgcgtgtccgtcaatggcgagccggcccatatcggccaacgc
gttgcgcccaacgatcaggtccgcgtgaacggcaaaccgatcatgcgcacgaatacgaaa
aagccgccgcgcgtaattctgtatcacaagccggctggcgaaatcgtcagccatgacgat
ccggccggccgcgccagcgtgtttgcacgcttgcccaagctgcgcacgggcaagtggctg
tcggtcgggcgtcttgacctgaacacggaaggtctgctgatcttcacgacgtcgggcgac
atggccaaccgaatcatgcatccgcgctatggcacggaacgcgagtacgcggtccgcgtg
ctgggcgagatggacgaagcgcagcgccagtcgctggtggacggcatcgaacttgaagac
ggcgtggccgcgttcggcgcgctggattacctgggtggcgacggcagcaaccgctggtat
cgcgtgaccttgcaggaagggcgcaaccgcgaagtccgccgcatgttcgaagcggtaggt
gtgacggtcagccgcctgatccgcactcgcttcggtgacgtggtcctgccgcgcacattg
cgtcgtggtcgctgggaagaattggatggttcgctggttaccgcgctgatggtccagctg
ggcctgttgcgcgatgacgacgaatccggcggcaaccgtcgccgttcgaagcagcccgtg
tcgcatgacagcgcgctgcctcccggcttcggcacgatggatcgcaatggtatgaacggc
gcccgaatcggtcgtcgcggcaaactgcaaggcggccggctgggtagcgcgggtcaaacc
gccgcatgcccgtccgatccctttggcaccggattgatgattgccggtggctatgccaac
ggtcatccgctggcctcggaagggccgggcggcaaccgcaagggcggcaaacccggcggc
gagcgttcggccgcagctggtggcggccgtcctggcggcaagcaaggcggcaagccgggc
ggaaaacccggcggcaagccgcgaggcccgcgcggtccgcgcgcggcggcggcagatggt
caacgcggcaacgtggcttcggctgatgtcggggccggcaacgtggccgaagcgcccgtg
ggcggtggccgcaaaccttcgggcggcaagcccggtggcaagccggcgggcgcgcgtggc
gccaatggtgggcgtagcggtaacggcaagcctgccggcgccggcggccgtggcggcaat
aaggcggaaggttcgcgcaatgccggcggctcggctgcgaacaagggtccgggggcgggc
ggcaagccgcgcgctccacgcagtgcttcctctgcctcgtcgggcccgcgcggcgacgat
tggcagccgcgaggcgcctcggcgcatgaatcgcggttgggtgtgatgggtggacgaggc
cgtcagggccgctga
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