KEGG   Achromobacter sp. B7: DVB37_08635
Entry
DVB37_08635       CDS       T05703                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
achb  Achromobacter sp. B7
Pathway
achb02024  Quorum sensing
achb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:achb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DVB37_08635
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DVB37_08635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:achb03019]
    DVB37_08635
   03036 Chromosome and associated proteins [BR:achb03036]
    DVB37_08635
Messenger RNA biogenesis [BR:achb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     DVB37_08635
Chromosome and associated proteins [BR:achb03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    DVB37_08635
SSDB
Motif
Pfam: Hfq LSM Hfq_1 SRP14
Other DBs
NCBI-ProteinID: AYD63978
LinkDB
Position
1915909..1916145
AA seq 78 aa
MSNKGQTLQDPFLNTLRKDHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI
STVVPARAVNFQVEVPAE
NT seq 237 nt   +upstreamnt  +downstreamnt
atgagcaataaagggcaaactctgcaagatccgtttctgaacacgctgcgcaaggatcat
gtgcccgtgtcgatctacttggtaaacggcatcaagcttcaagggcaaatcgaatctttt
gatcagtacgtggtgctgctgcgcaatacggttacgcaaatggtttacaagcatgccatt
tccaccgtcgttcccgcgcgcgccgtcaactttcaggtggaagtccctgctgaataa

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