Achromobacter sp. B7: DVB37_08680
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Entry
DVB37_08680 CDS
T05703
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
achb
Achromobacter sp. B7
Pathway
achb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
achb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DVB37_08680 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achb03021
]
DVB37_08680 (rpoD)
Transcription machinery [BR:
achb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DVB37_08680 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SPO22
TMPIT
Motif
Other DBs
NCBI-ProteinID:
AYD63986
LinkDB
All DBs
Position
1926524..1928800
Genome browser
AA seq
758 aa
AA seq
DB search
MTKSTGKSSSAIDAAETQAPAAKRAVSMAAEKAPAKTAVKVAKPAAKTAAKKATKTAAAD
KPEKVTKARAKKAEDKLADLVGGSAPRSGPVPSGRRPGRPAKNANNDGDGFDDTMDGEGE
VLPDLKPPKRGGKRGKADPKDLIARGPVTPEEYEARRNRLKQLIKLGKDRGYLTYGEIND
HLPDDLVDAEAIDGIISTFSDMGIAVYDQAPDAETLLMSENAPVASNDDDVEDEAEAALT
TVDSDFGRTTDPVRMYMREMGSVELLTREGEIEIAKRIEDGLKHMVMAISACPTTINEIL
AHILRVREGQAQIDEVVDGLVDPEDGEEYAGAGVTADEDESDDGPAGGMSSKQLEDLRVK
ALAKFDEVGKQFDKMRLSYEKDGYKSDIYVRAQESIQNELMGIRFTAKMVEKLADTLRNQ
VEEVRQLERAVLHTCVDRAGMPRTHFIKVFPGNETNLQWVVDEVSAGHPYAETLERQIPA
VQELQQKLIDLQTRVVLPLKDLKDVNKRMATGEAKARKAKREMTEANLRLVISIAKKYTN
RGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHM
IETINKMNRISRQILQETGAEPDPATLAQKMDMPEDKIRKILKIAKEPISMETPIGDDDD
SHLGDFIEDTSTLAPSDAALHGSMRDVVKEVLDSLTPREAKVLRMRFGIEMSTDQTLEEV
GKQFDVTRERIRQIEAKALRKLRHPSRADKLKSFLEGQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccaccggcaaatcctcctctgcaattgatgcggctgaaactcaggccccc
gcggccaagcgtgccgtaagcatggcggcggaaaaagcgcccgccaagacggcggtgaag
gtcgccaagcctgccgccaagacggctgccaaaaaggcaaccaagacggccgcggctgac
aagcccgaaaaagtgaccaaggctcgcgccaagaaggctgaggacaaactcgccgacttg
gtcggcggtagcgcacctcgttcgggtccggtacccagcggccgccgcccgggccgcccc
gccaagaacgccaataacgacggcgatggtttcgacgacacgatggacggtgaaggcgaa
gtgctgcctgacctgaagccgcccaagcgcggcggcaagcgcggcaaggcagatcccaag
gatctgatcgcgcgcggccctgtcacgcctgaagaatacgaagctcgccgcaaccgtctg
aagcagctcatcaagctgggcaaagaccgcggctacctgacatacggcgaaatcaacgac
catctgcctgacgacctggtcgacgccgaagccattgacggcatcatcagcacgttcagc
gacatgggtatcgcggtctacgaccaggcccccgacgccgaaacgctgttgatgagcgag
aacgccccggttgcgtccaacgacgacgatgtcgaagacgaagccgaagccgcgctcacc
accgtggattccgactttggccggaccaccgatcccgtgcgtatgtacatgcgcgaaatg
ggctcggttgaactgctgacgcgcgaaggcgaaatcgaaatcgccaagcgtatcgaagac
ggcttgaagcacatggtcatggccatttcggcctgcccgaccacgatcaacgaaatcctg
gcccacatcctgcgcgtgcgggaaggccaggcgcagatcgacgaagttgtcgacggcctg
gttgatccggaagacggcgaagaatacgccggcgccggtgtgaccgcagacgaagacgaa
agcgatgacggccccgcgggcgggatgtccagcaagcagctggaagacctgcgcgtgaag
gcgttggccaagttcgacgaagtgggcaagcagttcgacaagatgcgcctgtcgtacgag
aaagacggctacaagtcggatatctacgtgcgcgcgcaggaatccatccagaacgaactg
atgggcatccgcttcaccgcgaagatggtcgagaagctggctgacacgttgcgcaaccag
gtggaagaagtacgccagcttgaacgcgccgtcctgcacacgtgtgtggaccgtgccggc
atgccgcgcacgcacttcatcaaggtcttcccgggcaacgaaaccaacctgcaatgggtc
gttgacgaagtcagcgccggccatccttatgccgaaacgctggaacgtcagattcccgcg
gtgcaggaactgcagcaaaagctgatcgacttgcaaacgcgtgtcgtgctgccgctgaag
gacctgaaagacgtcaacaagcgcatggccacgggcgaagccaaggctcgcaaggccaag
cgcgaaatgaccgaggccaacctgcgtctggtgatctcgattgccaagaagtacacgaac
cgtggcctgcaattcctggatctgattcaggaaggcaacatcggcctgatgaaggccgtg
gacaagttcgagtaccgtcgcggctacaagttttcgacgtacgccacgtggtggattcgt
caggccatcacgcgttccatcgctgaccaggcgcgcaccatccgtattccggttcacatg
atcgaaacgatcaacaagatgaatcggatcagccgtcagattctgcaggaaacgggcgct
gagccggatcccgcgaccctggcgcaaaagatggacatgcccgaggacaagatccgcaag
atcctcaagatcgctaaagaaccgatctcgatggaaacgccgatcggcgacgacgatgat
tcgcacttgggcgacttcatcgaagacacctcgacgctggcgccttcggacgcggctttg
catggttccatgcgtgatgtggtcaaggaagtgctagactctctgaccccgcgtgaagcc
aaggttctgcgtatgcgtttcggtatcgaaatgagcaccgaccagaccctggaagaagtg
ggtaagcagttcgacgtgactcgcgagcgcatccgccaaatagaggctaaagcgctgcgc
aagctgcgtcaccccagccgcgccgataagctgaaaagcttcctcgaagggcagtaa
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