Achromobacter sp. B7: DVB37_11035
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Entry
DVB37_11035 CDS
T05703
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
achb
Achromobacter sp. B7
Brite
KEGG Orthology (KO) [BR:
achb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
achb03009
]
DVB37_11035 (dbpA)
Enzymes [BR:
achb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DVB37_11035 (dbpA)
Ribosome biogenesis [BR:
achb03009
]
Prokaryotic type
rRNA helicases
DVB37_11035 (dbpA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-ProteinID:
AYD67577
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All DBs
Position
complement(2447242..2448630)
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AA seq
462 aa
AA seq
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MTNTPFSTLPLLPALLDNLQSLGFEQMTPIQAQSLPLILEGRDIIAQAKTGSGKTAAFGL
GVLQKLDPTRLAPQALLVCPTRELADQVAQELRRLARLIPNVKILTLCGGAPARPQAESL
ARGAHLVVGTPGRIQDHLERGSLDLAGLTTLVLDEADRMVDMGFYDDIVAIASHCPTKRQ
TLLFSATYPDNIRKLSARFLRNPAEVKVEAQHDASRIEQIFFEIDEKDRLDAVARLLAHY
RPVSTLAFCNTKVRSHDLVERLQADGISAQALNGDLEQRERDEILIQFANQSCAVLVATD
VAARGLDIQNLGAVINVDVTKDTEVHVHRIGRSGRGDQKGLALSLCSPDEMRWANLVEQY
QGSPLKWGDIKSLKPKADRPLRAPMVTLCIQGGKKDKLRPGDLLGALTGDGGLTFEQVGK
INITEFNAYVALDRQIAKQAFSRVSNSNIKGRRFRMRFLEEF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaacacgcccttttctacccttccccttctgcccgccctgcttgataacctgcaa
agcctggggtttgagcaaatgacgcctatccaggcgcaaagcctgccgctgatcctggaa
ggccgcgacatcatcgcgcaagccaagaccggcagcggcaagaccgcggcgtttggcctg
ggcgtgctgcaaaagctggaccccacccgcctggcgccgcaagcgttgctggtgtgcccc
acccgcgaattggccgaccaggttgcccaggaactgcgccgcctggcgcgcctgattccc
aacgtgaagatcttgacgctgtgcggcggcgcccctgcccgcccccaagccgaatcgctg
gcgcgcggcgcgcatctggtggtgggcacgcccggccgtatccaggaccatctggaacgc
ggcagcctggacctggccggcctgaccacgctggtgctggacgaagccgaccgcatggtc
gacatgggcttctacgacgacatcgtggccattgcctcgcactgccccaccaagcgccag
acgctgctgttctcggccacctaccccgacaacatccgcaagctcagcgcgcggtttctg
cgcaaccccgccgaggtcaaggtcgaggcgcagcacgacgccagccgcatcgaacagatc
ttctttgaaatcgacgaaaaagaccgcctggacgccgtggcccgcctgttggcgcattac
cgccccgtgtccacgctggcgttctgcaacaccaaggtccgcagccacgatctggtggaa
cgcctgcaagccgacggcatcagcgcacaggcgctcaatggcgacctggaacagcgcgaa
cgcgacgagatcctgatccagttcgccaaccagagctgcgccgtgctggtggcgaccgac
gtggcggcccgtggcctggacatccagaacctgggcgccgtcatcaacgtggacgtcacc
aaggacaccgaagtgcacgtgcaccgcatcggccgcagcggccggggcgatcagaaaggt
ttggcgctaagcctgtgttcgcccgacgagatgcgctgggccaacctggttgagcaatac
cagggctcgcccttgaagtggggcgacatcaaatcgctgaaacccaaggccgaccgcccc
ttgcgtgcgcccatggtcacgctgtgcatccagggcggcaagaaagacaagttgcgcccg
ggcgacctgctgggcgccctgaccggcgacggcgggctgacgtttgaacaggtgggcaag
atcaacatcacggaattcaacgcctacgtggcgctggaccgccagattgccaagcaggcg
ttttcgcgcgtgtccaacagcaacatcaagggccggcgcttccgtatgcgctttcttgag
gaattctga
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