Achromobacter sp. B7: DVB37_16005
Help
Entry
DVB37_16005 CDS
T05703
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
achb
Achromobacter sp. B7
Pathway
achb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
achb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DVB37_16005 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achb03400
]
DVB37_16005 (uvrB)
DNA repair and recombination proteins [BR:
achb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DVB37_16005 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DVB37_16005 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
Kinesin
UB2H
AAA_22
DUF87
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AYD65252
LinkDB
All DBs
Position
complement(3575773..3577836)
Genome browser
AA seq
687 aa
AA seq
DB search
MVPVSADAPPVAGAEPRFVEYPGSPFQLFQPYPPAGDQPTAINGLTQGIEDGLMFQTLLG
VTGSGKTYTMANVIARLGRPALVLAPNKTLAAQLYAEMREFFPKNAVEYFVSYYDYYQPE
AYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTIIVGTVSCIYGIGNPGDYHAMVL
ILRSGDQISRREILARLVAMQYTRNDAEFTRGAFRVRGETIDIFPAESPELALRLTLFDD
EIESLELFDPLTGRIRQKLPRFTVYPGSHYVTPRDTVLRAIETIKVELRERVKRFVDDGH
LVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAPGDPPPTLIDYLPSDALMFIDE
SHVTIGQLSAMYRGDRSRKETLVQYGFRLPSAMDNRPLKLEEFEARMRQCVFVSATPAAY
EKEHADNVVEQVVRPTGLVDPLVEVLPARTQVDDLLGQIKARVSVGERVLVTTLTKRMAE
DLTDFLSEHGVKVRYLHSDIDTVERVEILRDLRLGTFDVLVGINLLREGLDIPEVSLVAI
LDADKEGFLRSERSLIQTIGRAARNLNGHAILYADRITDSMQRAMEETSRRRAKQLQFNI
DNGITARGVRKAVRELIDGIVAPVQHDALEAAVPAEFLKDEKALARELKRLEKLMMDHAR
NLEFEQAAAARDALTALKQRVLLDGAV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
gtggtaccagtatcggctgacgcaccgcccgttgctggcgcggaaccgcgctttgtggaa
tatcccggtagcccgttccagctgttccagccctatcctccggccggcgatcagcctacc
gcgatcaacgggttgacccagggtatcgaagacggcctgatgttccagacgctgctgggc
gtgacgggctcgggcaagacctacaccatggcgaacgtgatcgcgcggctgggacgccct
gcgttggtgttggcgcccaacaaaacgcttgcggcgcagctatatgccgaaatgcgggag
ttctttccgaagaacgcggtcgagtatttcgtttcgtactacgactattaccagcccgag
gcctatgtcccgacgcgcgacctgttcattgaaaaggattcgtccatcaatgagcacatc
gaacaaatgcgtctatcggctaccaagagcctgcttgaacgccgggacactattattgtc
ggcacggtgtcttgcatctacggtattggtaatcccggcgactaccacgcgatggttttg
attctgcgcagcggtgaccagatctcgcggcgggaaatcctggcgcgtctggttgccatg
caatacacccgcaatgacgccgaattcacgcggggggcgttccgggtccgtggcgaaacc
atcgacatcttcccggcagaaagccccgagctggcgctgcgcctgacgctttttgatgac
gagatcgaaagcctggagttgtttgatcccctgacgggccgcattcggcaaaagctgcca
cggtttaccgtgtatcccgggtcgcattacgtcaccccgcgcgatacggttctgcgcgcg
attgaaacgatcaaggtggaactgcgagagcgtgtcaaacgcttcgtggacgacggtcat
ctggtcgaagcccagcgtctggaacagcgcacgcggttcgatctggaaatgctgcaggag
ttaggcttttgcaaggggatcgaaaactactcccgccacctgtccggcgccgcaccaggc
gacccgccacccacgttgatcgattacctgccgtccgacgcgctgatgttcatcgacgaa
agccacgtgaccattggccagctcagcgccatgtatcgcggcgaccggtcgcgcaaggaa
acgttggtgcaatatgggttccggttgccctccgcgatggacaatcggcccctcaagctt
gaagaattcgaggcgcggatgcgccaatgcgtgttcgtgtcggccacgccagcggcttac
gagaaagaacacgctgacaacgtcgttgagcaggtcgttcggcccaccggcttggtcgat
cctttggtcgaggtattgccagctcgcacccaggtggacgatttgttgggccaaatcaag
gcacgggtttcggtgggcgagcgggtgctggtcaccaccctgaccaaacgcatggccgaa
gatttgacggatttccttagcgaacacggcgtcaaggtgcgctacttgcactccgacatt
gataccgtcgagcgcgtggaaattctgcgggacctgcgcctaggcacctttgatgtgttg
gtgggcatcaacctgctgcgcgaggggctggatattcccgaggtttcgctcgtggcaatt
cttgacgccgacaaggaaggcttcctccgatccgagcgcagcttgatccagacgattggc
cgcgcggcccgcaacctgaacggccacgccattctctatgcagaccgtattacggattcg
atgcagcgcgcgatggaggaaaccagccgtcggcgcgcaaagcagctgcagttcaatatc
gacaatggcattacggcgcgcggcgtccgcaaggccgtgcgtgagctgatcgacggcatc
gtcgcgccagtgcagcacgacgccctcgaagccgccgtgccggccgagttcctcaaggac
gagaaggccttggctcgcgagttgaagcgcttggagaagctgatgatggaccatgctcga
aacctggagttcgaacaggccgctgccgcacgcgatgcgcttaccgcgctgaagcaacgt
gttcttcttgatggggccgtataa
DBGET
integrated database retrieval system
