Achromobacter sp. B7: DVB37_21145
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Entry
DVB37_21145 CDS
T05703
Name
(GenBank) nuclease
Organism
achb
Achromobacter sp. B7
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
DEAD
AAA_30
TPR_GEMI5
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AYD66155
LinkDB
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Position
complement(4671382..4675092)
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AA seq
1236 aa
AA seq
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MADTERLPQDHAARTDALDPTRSFLVQAPAGSGKTELLTDRILALLATVNRPEEIVAITF
TRKAASEMHARVLSKLRRGLDAPPEAMHERRSWELARAALARNAEQGWHLLDHPARLAIR
TIDSFCAGLVRSMPWLSELGGMPDITDDARAHYEAAARATLDLADDYDAVRVLLKHLDVD
VQAAKDALADMLGQRDQWLPLLRHGSDRAGMEAMLAEAIGEDLDALCDAMPLGWADALCG
PARLAASHLQDGEDDNKLLALLDWTEELPPDAEMLDQWRAVAHLLLTGTGSLRKTVNKNL
GFPAKCAHKEPFVAWLESADGQAAWVRRLHAVRDIPAPHFTDAQWEVLGAQLMTLALAVA
QLRLRFADKGEVDFIEIAQRAAAALGSADDPGELLLKLDASIRHLLIDEFQDTSQTQLDL
LRTLTSGWQAGDGRSLFLVGDPMQSIYRFRKAEVGLFLEVADIGVGELTPDFLNLTDNFR
SQAGIVEWVNRSFAGLLPRRSDAAAGAIAYSPSTAFHEALPDPAVRFHPAWSRAGGTPAE
EQAEDIAVGLVRQALIDHKGAKHPVAVLVRARSHLGNLTRRLAQEGIRCRAVDLVPLALR
PVVADLVQLVRALSHPADRMAWLSVLRAPYCGLTLTSLQRLFGDDHVTPVPVLLERALRM
TPATAPTAAAGASAVAGSGGGGATDASAAATAPSAAASRVVAPARGISASGPQGSLFEAD
SGAQGGAAQGSLFDANPGAAGSASQSAPLDSASSGVGRVAQGAWPEAESPAPEPPLAQAL
LSPDEFERLRQVAAVLLDKRNASGAMPFAAWVESLWRRLGGPALYAGLSVSNDAESLFQL
VERLAPHGAIDPAALDAGISRLFAAPDAADEDDGAVEIMTMHKSKGLQFETVILYGLHRA
PRGDQAPLVRFEQSSGRVLFGPVKPRAEVEADPISRYLGAREARRASYEIDRLLYVAATR
ARKRLHLVGHVSIDEASGQVKAPPSASLLGRLWPCLVTPEPPPLDQQPEPDAADTPEWQG
EPLRRVAGNGLTQLAQQSNVLISAGFGTADRGAWGDGTEHPAWQLEAGYDAAIGTLAHAW
LARIGQDGVQAWPPEALTDRLPAMRRQLTRAGIPASQADDAAEAVLETLQATLSDERGLW
LLSQSGARREWPLIDAAGKVSVIDLALSTEDGWLIVDYKTGRPHPGEPPAAFATRMRQRH
GDQLLRYCSQVTSLDGRKAKAALYFPRAKAWIDLHQ
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggccgacactgaacgcctgccacaggaccacgccgcgcgtaccgacgcgctggatccc
acccgctcttttctcgtgcaggcgccggccggctcgggcaagaccgaactgctgaccgac
cgcatcctggcgctgctggccacggtgaaccggcccgaggaaattgtcgccatcacgttc
acgcgcaaggctgcatccgaaatgcacgcgcgcgtgttgagcaagctgcgccgtgggctg
gacgccccgcccgaggccatgcacgagcgccgcagctgggaactggcacgcgccgccttg
gcgcgcaatgccgagcagggctggcatctgctggaccatccggcgcgcctggccatacgc
accatcgactcgttttgcgcgggcctggtgcgcagcatgccgtggctgtccgagctgggc
ggcatgccggacattaccgacgatgcacgcgcgcactacgaagcggcggcgcgcgccacg
ctggatcttgccgatgactacgacgcggtgcgcgtgttgctcaagcatctggatgtggac
gtgcaggcggccaaggatgccctggccgacatgctgggccagcgcgaccagtggctgccg
ctgctgcgccacggctccgatcgcgccggcatggaagcgatgctggccgaggccatcggc
gaagacctggacgcgctgtgcgacgccatgccgctgggctgggccgatgcgctgtgcggc
ccggcccgcctggccgcgtcccatttgcaggatggcgaggacgacaacaagctgctggcg
ctattggactggacggaagaactgccgccggacgccgaaatgctggaccagtggcgcgcc
gtggcgcatctgctgttgaccggcacgggcagcctgcgcaagaccgtcaacaaaaacctg
ggctttccggccaagtgcgcgcacaaggagccctttgtggcatggctggaatcggccgac
gggcaggccgcctgggtgcgccgcctgcacgccgtgcgcgacattccggcgccgcatttc
acggacgcccaatgggaagtgctgggcgcgcagttgatgacgctggcgctggccgtggcg
caattgcgcctgcgtttcgcggacaaaggcgaggtcgatttcatcgaaatcgcgcaacgc
gcggccgctgcgctgggcagcgccgatgatcccggcgaactgttgctgaaactggacgcg
tccattcgccatctgctgatcgacgaattccaggacaccagccagacacagctggacttg
ctgcgcacgttgacctcgggctggcaggcgggtgacgggcgcagcctgttcctggtgggc
gacccgatgcaatcgatctaccggtttcgcaaggcggaagtgggcctgttcctggaggtg
gccgatatcggcgtgggcgaattgacgcctgatttcctgaacctgaccgacaacttccgc
tcgcaggcgggcattgtggaatgggtgaaccgttcgtttgcgggtctgctgccccggcgt
agcgacgccgcggcgggcgccatcgcgtacagcccgtccaccgcgttccacgaggcgctg
cccgaccccgcggtgcgattccaccccgcttggtcgcgcgcgggcggcacgcccgccgag
gagcaggcagaagatatcgccgtcggcctggtgcgccaggcgctgatcgatcacaaaggc
gccaagcaccccgtggcggtgttggtgcgcgcgcgcagccatctgggcaatctgacgcgc
cggctggcgcaggaaggcatccgctgccgcgccgtggacctggtacccctggcgctgcgg
ccggtggtggccgacctggtgcaactggtgcgcgcgctgtcgcacccggccgaccgcatg
gcctggctgtcggtactgcgcgccccgtactgcgggctgacgctgacgtccctgcaacgc
ctgttcggcgacgaccacgtcacgccggtcccggtactgctggaacgcgcgctgcgcatg
acgccggccaccgctccgacggcggctgctggcgcttcggctgtcgctggtagtggtggt
ggtggtgctactgatgcttccgctgctgcaactgcgccgtctgctgccgcctcgcgagtc
gtcgcgccggcgcgcggtatctccgccagcggcccgcaaggctcgttgttcgaggccgac
tcaggcgcgcagggcggtgccgcgcaaggctcgttgttcgacgccaatccaggcgccgca
ggcagcgcctcgcaatccgcaccgttggacagcgcatcgtccggcgtcggccgtgttgca
caaggcgcatggcctgaagccgaatcgcccgcgcccgagccgccattggcgcaagccctg
ctgagccccgacgaattcgaacggctgcggcaagtggcggccgtgctgctggacaagcgc
aatgcctcgggcgcgatgccgttcgccgcctgggtggaatccctgtggcgccgcctgggc
ggccccgcgctgtacgccggcctgtcggtgtcgaacgacgccgaaagcctgttccagctg
gtcgaacgcctggccccgcacggggccatcgacccggcagcgctggacgccgggatctcg
cgcttgttcgccgcgcccgacgcggcggacgaggacgacggcgccgtcgagatcatgacc
atgcacaagtccaagggcctgcaatttgaaaccgtgatcctgtacggcctgcatcgcgcc
ccgcgcggcgaccaggcgccgctggtgcgtttcgaacaaagcagtggccgcgtgctgttc
ggccctgtcaagccgcgcgccgaggtcgaggccgacccgatatcgcgctacctgggcgcc
cgcgaggcccgccgcgcatcctatgaaatcgaccgcctgctgtacgtggccgccacccgc
gcgcgcaaacgcctgcacctggtgggccacgtgtccatcgacgaagccagcggccaggtg
aaagccccgccatccgccagcctgctgggccgcctctggccctgcctggtcacccccgaa
ccgcccccgctggaccaacagcccgaaccggacgccgccgacactcccgaatggcaaggc
gaacccctgcgccgcgtcgctggcaacggcttgacgcaattggcccaacagtccaacgtc
cttatcagcgccggtttcggcaccgccgaccgcggcgcctggggcgacggcaccgaacac
cccgcctggcaactggaagccggctacgacgccgccatcggcacgctggcccacgcctgg
cttgcccgcatcggccaagacggcgtacaagcctggccgcccgaagccctgaccgaccgc
ctgcccgccatgcgtcgccagctgacccgggccggcatccccgcctcccaagccgacgac
gccgccgaagccgtactggaaacgctgcaagccaccctgtccgacgaacgcggcctatgg
ctgctatcccaatccggcgcccgccgcgaatggcccctgatcgacgccgccggcaaggtc
tccgtcatcgacctggcgctgagcaccgaagacggctggctgatcgtcgactacaaaacc
ggccgcccccaccccggagaaccccccgccgccttcgccaccagaatgcgccaacgccac
ggcgaccaactcctgcgctactgctcgcaagtcacgtccctagacggccgcaaagccaaa
gccgccctctatttcccccgagccaaagcctggatcgacctgcaccaataa
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