Aquila chrysaetos chrysaetos (golden eagle): 115333688
Help
Entry
115333688 CDS
T08023
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Pathway
achc04140
Autophagy - animal
achc04148
Efferocytosis
achc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115333688 (VPS39)
04148 Efferocytosis
115333688 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115333688 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
achc04131
]
115333688 (VPS39)
Membrane trafficking [BR:
achc04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
115333688 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
115333688
NCBI-ProteinID:
XP_029852849
Ensembl:
ENSACCG00020005752
UniProt:
A0A663E8X7
LinkDB
All DBs
Position
2:42185032..42211772
Genome browser
AA seq
884 aa
AA seq
DB search
MHDAFEHVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIKKDIGEVMSSESVCCNRF
EVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTC
DLQQSDTGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFK
RDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNEEGVCTQKCALN
WTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGTNIIYVASNHF
VWRLIPVSIATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIHHIKNLFAFNLFCQKRF
DESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPGLSGAELEKAHLALIDYLTQ
KRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRL
ENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQY
LQHLGTENLHLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLIENFKSLTIP
YLEHIIHVWEETGADFHNCLIQLYCEKVQALMKEYLSSYPADKTPVPAGEEGGDLGDYRK
KLLLFLEKSSWYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTNMAENY
CHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAALQVLELHHSKL
DTTKAINLLPANTQISEIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQV
KCIITEEKVCTVCKKKIGNSAFARYPNAIVVHYFCSKEVNTLDT
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagcacgtgccgatcttggagaaactgccgctgcagatcgactgc
ctggcggcctgggaggaatggctccttgttggtaccaaacaagggcatcttttgctttac
aggatcaagaaagacataggagaggttatgtcatcagaaagtgtctgttgcaataggttt
gaagtgacactagagaaatccaacaagaacttctcaaaaaagattcagcagattcatgtt
gtttctcagtttaaaattctggtcagtctattagaaaataacatttatgtccatgaccta
ttgacatttcaacaaatcaccacagtttccaaggcaaaaggtgcatctctcttcacttgt
gatcttcagcagtcagatacaggggaagaggtgctgagaatgtgcgtggcagtgcggaag
aagctacaactttatttttggaaggacagagagttccatgaactacagggggacttcagt
gtacctgatgtaccaaagtctatggcctggtgtgaaaactccatctgtgtaggcttcaag
agggactattacctgatacgggtggatggaaaaggatccatcaaagaactgtttcccaca
gggaagcagctggaaccattggtagctcctgtagcagatgggaaagttgcggttggccaa
gatgatctaacagttgtgctaaacgaagaaggggtctgtactcagaaatgtgccttgaat
tggacagatattcctatagccatggaacaccagcctccctacatcattgctgttctgccg
aggtatgtggagattcgtacttttgagccccggctgctggtacagagtattgagctgcag
agaccacgcttcatcacctctggaggcacaaatattatatatgtggcaagtaatcacttt
gtttggcggctcattccagtgtcaatagccacacagatccagcagcttctgcaggacaag
cagtttgagttggctttgcagttggcagaaatgaaagatgattcagatagtgagaagcga
caacaaattcaccacataaagaacctctttgccttcaacctcttctgccagaagcgcttt
gatgaatccatgcaagtttttgccaagcttggtacagatcccactcacgtgatgggtctg
tatcctgacctcctgcccacagattacaggaaacagctacagtatcccaaccccctgcca
gggctctctggggcagagctggagaaggcacatttagctctgatagactacttaactcaa
aaaagaagtcagctggtgaagaagctaaatgattctgatcatcagtccagtacgtcaccc
ctcatggaaggaacacccacgatcaaatccaaaaagaagctgctacaaatcattgatacc
acccttttaaagtgttacctccatacaaatgtagcactggtggcaccattgctacgtctg
gagaacaatcactgccatattgaggagagtgagcatgtactaaagaaggcacacaaatat
agtgagctgataatactgtatgagaagaaaggtctgcatgagaaagcattacaggtactg
gtggatcagtcaaagaaagccaactcacctttgaagggtcatgagaggacagtgcaatat
ctgcagcatttgggtacagagaacttgcacttggtattttcctactctgtctgggtgcta
agagattttcctgaagatggactgaagatatttacagaagacctccctgaagtggaagct
ttgccacgagataaagtgctcagtttcttgatagaaaattttaaaagcttgactattcct
tatctggaacacatcattcatgtctgggaagaaaccggtgcagactttcacaactgtctg
atccagctgtactgtgagaaagtgcaggccttaatgaaagaatatctcagttcttaccct
gcagataaaaccccagtgcctgctggggaggaaggaggagacttgggggattaccggaaa
aagcttctactttttctggagaagtctagctggtatgaacctagtcgactaattagtgac
ttcccctttgatggtctcctagaagaacgtgctctgctcttgggtcgtatggggaagcac
gagcaagctctgtttatttatgttcatattttgaaggacaccaacatggctgaaaactac
tgccataaacattatgacagaaacaaagatggcaacaaagatgtctatctgtcactgctt
cggatgtatctctccccacctagcgttcattgcctgggaccaatcaagatggaagtgctg
gagcctcaagccaatctgcaggctgctctgcaggttttggaactacatcacagcaaactg
gatactaccaaggcgataaacctgctcccagcaaatacccagattagtgagattcgaatc
ttcttagagaaagtccttgaagaaaatgctcagaagaaaagatttaatcaagtactcaag
aatcttctccatgcagagtttctgagggtccaggaggagcggatcttgcatcagcaagtg
aagtgcattattacagaggagaaggtgtgcactgtatgtaaaaaaaagataggtaacagt
gcgtttgctcgataccctaatgcaatagtcgtgcattatttctgctccaaagaagtcaac
acattggacacctga
DBGET
integrated database retrieval system
