Aquila chrysaetos chrysaetos (golden eagle): 115336459
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Entry
115336459 CDS
T08023
Symbol
MTREX
Name
(RefSeq) exosome RNA helicase MTR4 isoform X1
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Pathway
achc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115336459 (MTREX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achc03019
]
115336459 (MTREX)
03041 Spliceosome [BR:
achc03041
]
115336459 (MTREX)
03009 Ribosome biogenesis [BR:
achc03009
]
115336459 (MTREX)
03016 Transfer RNA biogenesis [BR:
achc03016
]
115336459 (MTREX)
Enzymes [BR:
achc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115336459 (MTREX)
Messenger RNA biogenesis [BR:
achc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
115336459 (MTREX)
Spliceosome [BR:
achc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
115336459 (MTREX)
Complex C
U4/U6.U5 tri-SnRNP related factors
115336459 (MTREX)
Ribosome biogenesis [BR:
achc03009
]
Eukaryotic type
Pre-60S particles
Helicases
115336459 (MTREX)
Transfer RNA biogenesis [BR:
achc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
115336459 (MTREX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
ResIII
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
115336459
NCBI-ProteinID:
XP_029859278
Ensembl:
ENSACCG00020014491
UniProt:
A0A663FAZ9
LinkDB
All DBs
Position
Z:complement(68200446..68251314)
Genome browser
AA seq
1029 aa
AA seq
DB search
MADAFGDELFSVFEEDSAAASGTKKSKAGATEGARRQLEEKSSVAVAGKPKREMEVDSTE
DAVLGKKPKLEDVSEDANLADLMPQVKVQAVETVEGCTHEVALPADEVFTGLKPRTGKAA
KEYPFILDAFQREAILCVDNNQSVLVSAHTSAGKTVCAEYAIALALRDKQRVIFTSPIKA
LSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDE
IHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRP
TPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLRDAGDLAKGDQKGRKGGMKGPSN
VFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSD
EDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPA
RTVLFTSASKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLK
GSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRTIPEIVERVNNLEGQYN
KIAIPNEENVVIYYKIRQQLAKLGKEIEEYVHKPKYCLPFLQPGRLVKVKNEGDDFGWGV
VVNFSKKSNVKPNSGELDPLYVVEVLLHCSKESLKNSATEAAKPAKPDEKGEMQVVPVLV
HLLSAISSVRLYIPKDLRPIDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIKDQGLKKV
IQKVEAFEHRMYSHPLHNDPNLETVYKLCEKKAQIAMDIKAAKRELKKARTVLQMDELKC
RKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFV
FQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEENYLNSFRPNLMDVVYTW
ANGANFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRD
IVFAASLYL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcgttcggggacgagctcttcagcgtgtttgaggaggactcggccgctgcc
tccggcaccaagaagagcaaagcgggcgccaccgaaggcgccagaagacaactggaggaa
aaatcttcagtagctgtggcagggaagcccaaaagggaaatggaggtcgatagtactgaa
gatgccgttttgggaaagaagccaaaattggaggacgtatcagaagatgctaatctggca
gacctgatgcctcaagtaaaggtgcaagctgtggaaactgttgaaggttgtacacatgag
gttgcacttccagcagatgaagtcttcacaggtctgaagccaagaactggaaaagctgca
aaagaatatccatttattcttgatgcctttcagagagaagctattctttgtgtagataat
aaccagtctgtgttagtgtcagctcatacatcagctggtaaaactgtttgtgcagagtat
gcaattgccttggctttgagggataaacagcgtgtgatatttacgagtccaattaaagct
ttgagtaatcagaagtaccgtgagatgtacgaagaatttcaggatgtcggtttgatgact
ggggatgtcaccattaatcctacagcttcttgcctggtaatgacaaccgagattttgaga
agtatgctctacagaggttctgaggttatgcgagaagtcgcatgggttatttttgatgaa
atccactacatgagagattcagaacgtggtgtggtttgggaagagacaattattttgctc
cctgacaatgttcattatgtgttcctttctgcaactattccaaatgcccgtcagtttgct
gaatggatctgccatcttcacaaacagccttgccatgtgatttacaccgactatcgaccc
actccactgcagcattatatattcccagcaggaggagatggactccatctggttgttgat
gaaaatggagatttcagagaagataattttaatacagcaatgcaagtgcttagagatgca
ggagacttagcaaaaggggaccagaaaggcaggaaaggcggaatgaaaggtccttcaaat
gtttttaagattgtgaagatgatcatggaaaggaatttccaacctgtgattattttcagc
ttcagtaagaaagactgtgaagcctatgcacttcagatgacaaagttagatttcaataca
gatgaagaaaaaaagatggttgaagaagtgttcaataatgcaattgattgtctgtcagat
gaagacaaaaagcttcctcaggttgagcatgtgcttcctcttctgaagcgaggaattggt
atccatcatggtggtctacttcctatcttaaaagaaaccatagaaattcttttctctgag
ggcctaataaaggccttatttgcaacggagacttttgctatgggaattaatatgccagcc
aggactgtactatttacgagtgccagcaaatttgatggaaaagatttccgatggatatct
tcaggtgaatacattcaaatgtcaggtcgtgcaggacgccgaggtatggatgacagagga
atagtaattcttatggtggatgaaaaaatgagtccaacaattggcaagcagcttttgaag
ggttcagctgatcctttaaacagtgcattccacctgacatacaacatggtattgaacttg
cttcgagtagaggaaattaaccctgaatacatgttagaaaaatccttctatcagttccag
cattacagaactattccagaaatagtagaaagagtgaataatttggaaggacagtacaac
aaaatagcaattcccaatgaagaaaatgtggtcatatactacaaaatccgacagcagctt
gcaaaactgggtaaagagattgaagaatatgttcacaaaccaaagtattgcttgccattt
ctacagccaggaagactggtaaaggtgaagaatgaaggtgatgactttggatggggagtg
gttgttaatttctctaagaaatcaaatgttaagccaaattctggtgaattggacccatta
tatgtagttgaagtgctactacactgcagcaaagagagtttgaaaaattctgctactgag
gctgcaaagccagccaaacctgatgagaaaggcgagatgcaggttgttcctgttttggta
catctcctctcagctatcagcagtgtccgactttacataccgaaagacctgaggcctatt
gacaacaggcaaagtgtgttaaaatctatacaggaagtacagaagcgatttcctgatgga
gtaccattactagaccctattgatgacatgggcatcaaagatcaaggactgaaaaaagta
atccaaaaagtagaggcatttgagcataggatgtattcgcatcctcttcacaatgatccc
aacttggaaactgtatacaaactttgtgaaaaaaaagcacagattgctatggatattaaa
gcagcaaagcgagaactgaaaaaagccagaactgtcttacaaatggatgaactcaaatgc
cgcaagcgtgttttgagaagactggggtttgccacgtcttcagatgttattgagatgaaa
ggacgggtcgcttgtgaaatcagcagtgctgacgaactactcttgacagaaatgatgttc
aatggtctcttcaatgacttatctgcagaacaggcaactgcactactaagctgtttcgta
tttcaagagaactccagtgaaatgccaaaattgacagagcagttggcaggaccacttcgg
caaatgcaggagtgtgcaaaaagaattgccaaggtgtcagcagaagcaaaactggaaatt
gatgaagaaaattacttaaattctttcagacccaacctgatggatgttgtgtatacatgg
gcaaatggagctaactttgctcacatctgcaaaatgactgatgtctttgaagggagcata
attcggtgcatgagaaggctagaagaattgcttcggcagatgtgccaggctgcaaaagcc
attggaaacacagagttggaaaataagtttgcagaggggattacaaaaatcaagagagat
attgtgtttgctgcaagcctttacctgtaa
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