Aquila chrysaetos chrysaetos (golden eagle): 115336571
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Entry
115336571 CDS
T08023
Name
(RefSeq) LOW QUALITY PROTEIN: 3'-5' RNA helicase YTHDC2-like
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
achc03041
]
115336571
Enzymes [BR:
achc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115336571
Spliceosome [BR:
achc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115336571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
Helicase_C
R3H
HA2_C
RNA_hel_CTD
DEAD
WHD_HA2
AAA_19
Ank_2
nSTAND3
ATPase
AAA_22
PhoH
Ank_4
AAA_7
nSTAND_NTPase5
SRP54
AAA_30
Motif
Other DBs
NCBI-GeneID:
115336571
NCBI-ProteinID:
XP_040977060
Ensembl:
ENSACCG00020015762
LinkDB
All DBs
Position
Z:complement(23075889..23120204)
Genome browser
AA seq
1345 aa
AA seq
DB search
MSRPSSVSSRQPGGGSAAAAAASAAAASAGPAAGRGKRLKDIRVDEEVEIAVNLALERFR
YGEEKEMEFPSSFSSTERAFVHRLCQSLGLISKSKGKGANRYLTVRKKDRSELTHAVMTC
GLAPSTKHTVRSLIQRFPVTNKERTELLPKTERGNACAVESENRDVNKTSGRLNNGIPQV
PVKRGESEFDSFRQSLPVFEKQEEIVKIIKDNKVVLVVGETGSGKTTQIPQFLLDECYRN
GTPCRIFCTQPRRLAAVGVAERVAAERREKVGQTVGYQIRLESRVSPKTLLTFCTNGILL
RTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLIKLRDVLQKQTNLKLIISSAALDANLFI
RYFGSCPVIHIQGRPFEVKEMFLEDILRSTGYTNKEMIKYKKEKQREEKQQSTLTEWCSA
QENNSKVESRRQRSVPRATEEYNLLDDSGDAVFNQLTEKDANCLEPWLIKEMDSCLSDIW
LHKDIDAFAQVFHLILTENVSVDYRHSETSATALMIASGRGFLSQVEQLISMGASIHCKS
SNDWMALDWAKRFGQTEVVDLLESYSASVEFGNLDESSLVQSSGSDLSAEDRELLNAYHH
SFDDEKVDLDLIMHLLYNICHSCDAGAILVFLPGYDEVVSLMDRILFDDKRFADNAHRYE
VFMLHSNMQTLDQKKVLKSPPSGVCKIILSTNIAETSITVNDVVFVIDSGKMKESFDALS
CVTMLKMVWISKASAIQRKGRAGRCQPGVCFHLFSRLRFQNMLEFQTPELLRMPLQELCL
HTKLLAPINCPIVDFLMKAPDPPPALIVRNAVQMLKTIDAMDPWEDLTELGYHLTELPVE
PHLGKMVLSAVVLKCLDPVLTIACTLAYRDPFVLPALASQKRAAMLCRKRFTAGTFSDHM
VLLRAFQAWQKARSDGWERAFCEKNFLSQARMEIIIGMRTQLLGQLRASGFVRSRGGADI
RDVNTNSENWAVVKAALAAGMYPNLVHVDRESLVLTGPKEKKVRFHPTSVLSQPQYKKIP
PANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSVVTPVTVSLFCGPARLPSNALQEPS
SFRGDGVSNDNSDSEMEDRTTANLALLKLDEWLHLKLDPEAAGLLLQLRQKWHSLFLRRM
QAPSKLWSQVDEITIRAIVTVLSTEEQSAGLQQPSRIXPRPMTFGELPLASTWKSTNSRK
SSAETEFSDDSSNAEKVLMKSTPPTLHQPKKYKEKNFLHSKRTLDDRSDQSSVKSTDSSS
YPSPCASPSPISGKGSKSPSPRPNMPFRYFIMRSSNVQNIDISQQKGIWSTTPSNERKLN
RAFWESSMVYLIFSVQGSGRFPAQT
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcccagtagcgtctcgtcgcggcagcctggcgggggctcggccgccgcggcc
gccgcctccgccgccgccgcctccgccggccccgcggcgggccgcggcaagaggctgaag
gatatccgcgtcgacgaggaggtggagatcgcggtgaacctcgccctggagcggttccgg
tacggagaggagaaagaaatggagtttccttcctctttcagtagcaccgaaagagcattt
gttcaccggctctgtcagtctctcgggctgatatctaaaagcaaagggaaaggagcaaat
cgatacctgactgtcaggaagaaggatagatcagaactaacacacgcagtaatgacttgc
ggcttggctcccagtacgaaacataccgttcggagtttaattcagagatttcctgtcaca
aataaagaacgaacagaacttctgccaaagacggagcgaggaaatgcatgtgctgttgaa
tctgaaaacagagacgtgaacaagacaagtggacggcttaacaatggtatcccccaggtt
ccagtgaaaagaggggaatcggagtttgattccttcaggcaatccctaccagtttttgag
aaacaggaagaaattgtcaaaataataaaggacaataaagttgttttggttgtaggagag
actggatcaggaaaaactactcaaatccctcagttccttcttgacgaatgttacagaaat
ggaactccgtgtcgtatattttgcactcagccaagacgtttggcagctgttggtgtggct
gaaagagtggcagcagaaagaagagaaaaggttggccagacagttggttatcagatccga
ttagaaagcagggtttctccaaagacactgttaacattttgcactaatggcatactgctt
cgcacgctaatggcaggagacagcactctatcaactgtgacacatgttattgtggatgaa
gtacatgagagggataggttcagtgacttcttgttaataaaactcagagatgtgttgcaa
aaacagactaatctaaaactaattatttctagtgctgccctagatgcaaatctctttatt
aggtattttggaagttgcccagtaatacacatacaaggaagaccttttgaagttaaagag
atgtttttggaggacattttacgaagcactgggtatacaaacaaagagatgataaagtac
aaaaaagagaagcagcgagaagaaaaacagcaaagcactcttactgagtggtgttctgct
caagaaaataatagcaaagtggaatctcggagacaaagatctgtcccaagggcaactgaa
gagtataatctgttggatgatagtggtgatgcagtatttaatcaactgactgaaaaagat
gcgaattgccttgaaccgtggctaataaaagagatggattcttgtctttctgacatctgg
ttgcataaagatattgatgcctttgctcaagtgttccatctcattttaaccgaaaatgtc
agtgttgattataggcacagtgaaaccagtgcaactgcactgatgattgcttcagggaga
ggatttctgagtcaagtagaacaactgatcagtatgggagcaagtatccactgcaagtca
tccaatgactggatggctttggactgggctaagcgctttggacagacagaggttgttgac
ctgttggagtcctacagcgcttcagtggaatttggaaatctggatgaaagttccctcgtc
caatcaagtggtagtgaccttagtgcagaagacagagaactgttgaatgcttatcatcac
agttttgatgacgaaaaagtagatctggacctgattatgcacttactttataacatctgt
catagttgtgatgctggagcgattttagtatttcttcctggatatgatgaggtagttagc
ctgatggaccgtattctttttgatgacaagagatttgctgataatgctcacagatacgaa
gttttcatgcttcattcaaacatgcagactttggatcagaagaaggtgcttaaaagtcca
ccttctggcgtctgcaaaataattctttctactaatattgcagaaaccagcataacagtc
aatgatgttgtatttgttattgactcaggcaagatgaaagagtcttttgatgcactgagt
tgtgttacaatgctaaaaatggtgtggatttcaaaagccagtgctatccagagaaaaggc
agggctgggcgctgtcagccgggagtctgttttcatctcttcagcaggctccgatttcag
aatatgttggaatttcagactccagaacttctaagaatgccacttcaggagctttgttta
cacacaaaacttctggctccgattaattgtccaattgttgactttcttatgaaagctcct
gatcctccaccagctttaattgtgagaaatgctgtgcaaatgctgaagacaatagatgcg
atggacccttgggaagatctcactgaacttggttatcatctcactgaattaccagtagag
ccacaccttggtaaaatggtgttgagtgctgttgttttgaagtgcctggatcctgttctt
actattgcttgcactcttgcatatcgagacccttttgtcctacctgcactggcctctcaa
aagcgtgcagccatgctgtgtagaaaacgctttactgcaggaacctttagtgaccatatg
gtgcttctcagggctttccaggcatggcagaaggcgcgcagtgatggctgggagagagca
ttctgtgaaaagaacttcctgtctcaagcaaggatggaaatcattatagggatgagaaca
cagttgcttggccagcttagggcctcaggttttgttagaagcagaggaggagctgatatt
agagatgttaatactaattctgaaaactgggctgtagttaaagctgccttagcggctggg
atgtatcccaatctagtgcatgtagacagagaaagcctggttttgactggaccaaaggag
aagaaagtgcggtttcatcctacctctgttcttagtcaacctcagtataaaaagattccc
ccagcaaatgggcaagctgcagccattcaggcactccctacagactggcttatatatgat
gaaatgacaagagctcacaggatagcaaatatcagatgctgttctgttgtaacacctgtc
actgtgtcactcttctgtggaccagctagattaccaagtaatgctttgcaggaaccttca
tcctttcgaggggatggggtatctaatgataacagtgatagtgagatggaggacagaaca
actgctaatttggcactactgaagttagatgaatggctccatctcaaactggaccctgaa
gctgctggtttgttgttgcaactcagacagaagtggcatagcttatttctgcgtcgtatg
caagctccttctaaactgtggtctcaagttgatgaaataactataagagcaattgtaact
gttttaagtactgaagaacagtctgcaggtttgcagcagccttcaagaattnnaccaaga
cctatgacttttggagaacttcctttagcatctacatggaagtcaaccaacagtagaaaa
agctcagcagaaactgaattctctgatgactcctctaatgctgaaaaagttctaatgaaa
tctacgcctcccacacttcaccagccgaagaagtacaaagaaaagaactttttgcactcc
aaacgaactttggacgacaggtcagatcaatcatcagtgaagtctacagacagcagtagc
tatcctagcccctgtgctagtccttctccaatatctggaaagggttccaaatctccttca
ccaagacccaatatgccgtttcggtactttataatgagaagtagcaatgtgcaaaacatt
gatatttctcagcagaagggtatatggtctactacgccaagtaatgaacgaaaactaaat
agagccttttgggagagcagcatggtttacttaatattttctgttcaagggtctggacgc
tttccggctcaaacttga
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integrated database retrieval system
