Aquila chrysaetos chrysaetos (golden eagle): 115338859
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Entry
115338859 CDS
T08023
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Pathway
achc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115338859 (CSTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achc03019
]
115338859 (CSTF1)
Messenger RNA biogenesis [BR:
achc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
115338859 (CSTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
CSTF1_dimer
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
PROPPIN
VPS8_N
Beta-prop_WDR11_1st
Beta-prop_WDR75_2nd
Frtz
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
115338859
NCBI-ProteinID:
XP_029863646
Ensembl:
ENSACCG00020009093
UniProt:
A0A663EMP5
LinkDB
All DBs
Position
3:complement(7037120..7046794)
Genome browser
AA seq
537 aa
AA seq
DB search
MSGRRVAAACDRRQLPRGMGSMASPLLDPRPLRLPFLEADSRLQSICGRSMQQPSRRSIL
RSRPPPPPPPLPPPPIDALRAPVAILGGERGRQKEGSAPPRHSLLTMYRTKVSLKDRQQL
YKLIISQLLYDGYINIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDSAVQYAIGRSDT
VAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKI
LDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRD
YTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVS
CNPQDQHTDAICSVNYNASANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIF
SKNSKYILSSGKDSVAKLWEISTGRTLVKYTGAGLSGRQVHRTQAVFNHTEDYVLLPDER
TISLCCWDSRTAERRNLLSLGHNSIVRCIVHSPTNPGFMTCSDDYRARFWYRRSTTD
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtcgtcgtgtcgctgcagcatgtgacagacgtcagctgccacggggcatgggt
agcatggcatcccccctccttgacccgcgtccacttcgactgccgtttcttgaggctgac
agtcgcctccaatcgatttgcgggcgctcgatgcagcagccttcgcggaggagcattctt
cggtcccggccgccgccgccgcctcctcccctaccgccgccgccaatcgatgcgctcagg
gctccggtcgccattttagggggagagcgagggaggcagaaggaagggtcggcccctccg
aggcattccttgctcacaatgtatagaacaaaagtcagtttgaaagatcgtcagcaactt
tataaactgataattagtcagctgctatatgatggatacataaatattgccaatggcttg
ataaatgagataaaaccgcaatcagtctgtgcaccatctgaacaactgctgcacctaatt
aagttaggaatggagaacgatgacagtgctgttcaatatgcaattggacggtcagatacg
gtagctccaggcacaggaattgacttggaatttgatgcagatgtacagaccatgtctcct
gaggcttctgaatatgagacttgttatgtcacatctcataaaggaccatgtcgtgtagct
acatatagcagagacggacagttaatagctacaggatctgctgatgcctcaataaaaatt
cttgatacggagagaatgttggccaaaagtgctatgcctattgaggtcatgatgaatgag
acagcacagcaaaacatggaaaatcaccctgttattcggactctgtatgatcatgtggat
gaagttacgtgtttagcttttcatccaacagaacagatcctagcatctggttcaagggac
tacacacttaaattgtttgattattcaaaaccttctgccaaaagagccttcaaatatata
caggaagcagagatgttgcgctcaatttcttttcacccttctggagatttcatacttgtt
ggtacccagcaccctactttacgactgtatgatatcaatactttccagtgttttgtgtct
tgcaatcctcaagatcagcacactgatgctatatgttcagtaaattacaacgcaagtgca
aacatgtatgtgacaggaagtaaggatggatgcatcaaactgtgggatggtgtttcaaat
cgctgtatcactacttttgagaaggcacatgatggagctgaagtctgttctgctattttt
tccaaaaattcaaagtacatcttgtcaagtggaaaagactctgtagctaaactatgggag
atatccactggtcgaacactggtcaaatacacaggagctggtttgagtggacgacaagta
cacaggacgcaagctgtcttcaaccacacggaagattatgtgctgcttccagatgaaagg
accataagtctctgctgctgggattcaagaactgctgaacggagaaatcttctttctctt
gggcacaacagcattgtccgttgtattgtccattctcctaccaatcctggcttcatgacc
tgcagtgatgactacagggctagattttggtacagaaggtcaacgacagactaa
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