Aquila chrysaetos chrysaetos (golden eagle): 115339337
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Entry
115339337 CDS
T08023
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X3
KO
K13126
polyadenylate-binding protein
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Pathway
achc03015
mRNA surveillance pathway
achc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115339337 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
115339337 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achc03019
]
115339337 (PABPC1L)
03041 Spliceosome [BR:
achc03041
]
115339337 (PABPC1L)
Messenger RNA biogenesis [BR:
achc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115339337 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
115339337 (PABPC1L)
Spliceosome [BR:
achc03041
]
Complex C
Other components
Complex C specific factors
115339337 (PABPC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_RdRP1_2
RRM_3
ATP-grasp_2
DUF6262
DUF1464
Motif
Other DBs
NCBI-GeneID:
115339337
NCBI-ProteinID:
XP_029865036
Ensembl:
ENSACCG00020010303
LinkDB
All DBs
Position
3:11483164..11496633
Genome browser
AA seq
600 aa
AA seq
DB search
MNASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQ
QPVDAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFS
AFGNILSCKVVCDENGSRGYGFVHFETHEAATRAIETMNGMLLNDRKVFVGHFKSRKERE
AEFGARAMEFTNVYIKNFGDDMDDDRLQEIFSKFGKTLSVKVMMDNTGRSKGFGFVNFEK
HEEAQKAVADMNGKEINGRIVYVGRAQKRLERQSELKRKFEQIKQERVSRYQGVNLYVKN
LDDGIDDERLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVST
KPLYVALAQRKEERKAILTNQYMQRLATMRALPGPLLGSFQPPPGVLPTPHPAAAYPAAT
PILRAAVPPRRLLSNISTMRQASTQVPRVPPQAQRVANIGTQTVSTRVPSSPTLPRGAPQ
YKYSSAVRNAQPPVVAPQAGEPAVHVQGQEPLTASMLAAAPPQEQKQMIGERLYPLIHAM
HPSLAGKITGMLLEIDNTELLLLLESPDSLHGKIEEAVAVLQAHQATETSHKSSTTAFLQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctagtggccctggctatccgttagcttctctctacgtgggagacctccacccg
gatgtgaccgaagccatgctctacgagaagttctcgcctgctgggcccatcatgtccatc
cgagtctgtcgggatgttgccacacgccgatcactgggctatgcctacataaacttccag
cagcctgtggatgctgagcgagccctggacaccatgaactttgaagtgatcaaaggccgt
cccatccgcatcatgtggtcccagcgggaccccgggctcaggaaatcgggggttggaaac
gtcttcatcaagaacctggacgactccattgataacaaagccctgtacgacacgttctct
gccttcggaaacatcctgtcgtgcaaggtggtttgtgatgaaaacggatcccgtggctat
ggctttgttcactttgagactcacgaggcagcgactcgggccatcgagaccatgaatggg
atgttgctcaacgatcggaaggtatttgttggccatttcaaatcccgcaaagagcgtgag
gcagagtttggggctagggcgatggagttcaccaacgtctacatcaaaaactttggggat
gacatggatgacgacagactgcaggaaatattctccaagtttggaaagacgctaagtgtc
aaagtcatgatggacaacactggccgctcaaagggctttggatttgtcaacttcgagaag
cacgaagaagcccagaaggcggtagccgacatgaacgggaaggagatcaatgggcggata
gtgtatgtgggccgagcccagaagcggctggagcgccagagcgagctgaagcggaaattt
gagcagatcaagcaggagcgagtgagcaggtaccagggggtcaacctgtatgtgaagaac
ctggatgatgggatagatgatgagaggctgaggaaggagttctctccttacggcaccatc
accagtgccaaggtgatgacagagggtggccacagcaaagggtttgggtttgtatgtttt
tcctccccagaagaggctaccaaggccgtgacggaaatgaacggacgaatcgtcagcact
aagcccctctacgtcgcgctcgctcaaaggaaagaggagcggaaagcaatcctcaccaat
cagtacatgcagagattagccaccatgagggccctgcctggccctctcctgggctccttc
cagcccccccccggggtacttcctaccccccatcccgcagcagcatatcctgcagctacc
cccatcctgagggctgccgtgccgcctcggcgcctgctgtccaacatcagcactatgaga
caggcctccacccaggtgccccgcgtgcccccccaggcccagagagtggccaacattggg
acgcagacggtcagcacccgggtgccctcctcgcccaccctgccgcggggtgccccgcag
tacaagtactcctcagctgtcaggaatgcccagccgcccgtggtggccccgcaggcggga
gaacctgctgtgcatgtccaggggcaggagccgctgacagcatccatgcttgcagcagcc
cctcctcaggagcagaagcaaatgataggtgagcgcctgtaccctctgatccatgcaatg
catccctcgctggctggcaagatcactgggatgctgctggagattgataacaccgagctg
ctgctgctcctggagtcccccgactccctgcacggcaagatcgaggaagcagtggctgtt
ctccaagcgcaccaggctaccgagacatcgcacaagagcagcaccacggcattcctgcag
tga
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