Aquila chrysaetos chrysaetos (golden eagle): 115342432
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Entry
115342432 CDS
T08023
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Pathway
achc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115342432 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
achc03041
]
115342432 (PRPF40A)
Spliceosome [BR:
achc03041
]
Complex A
U1 snRNP components
U1 related factors
115342432 (PRPF40A)
Complex B
115342432 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
115342432
NCBI-ProteinID:
XP_029872422
Ensembl:
ENSACCG00020012312
LinkDB
All DBs
Position
6:complement(52431232..52457601)
Genome browser
AA seq
1027 aa
AA seq
DB search
MSGGDSAAAAAATASPQPLPFSLPKPPPLMQLTPGDAVRPVASAADQSPKSTRLAGRPDW
PAGKPVSLLAPLLPPRGEPEPLMPFGPSSRQPLRGRLLGRCSGGSLLSPSMRPGGVDRGS
LMMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGM
MMSHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQSSVLFRPQTTHPVVCAAQQTATTNSSV
NEEHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSG
KPYYYNSQTKESRWAKPKELEDLEAMIKAEENSTKPEESTPTPSASAAAAEAANTTTTAT
TAAETATAVSTTTATSAATAAPEAESAAASSVVENESTGTAAAEEQGQATSAPAVQEQSA
ETAANAADDSSKQEASADAASKKEDDDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNA
SWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLEN
HEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEA
LKNILDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEE
EEKQKSLLRERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQP
VFSSGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRA
TTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWED
IRDRFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSR
SGSESEDDDSHSKKKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESD
IEREKDKKERESEKDRARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLL
EQLDEDQ
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggggactcggcggcggcggcggcggcgaccgcctccccgcagccgctcccg
ttctccttgccgaagccccctcccctcatgcagctgacgccgggggacgccgtccgcccc
gtcgcttccgccgcggaccaatcgccgaagagcacccgactggcgggccgccccgattgg
ccggccggcaagccagtcagcctgctggccccgctgctcccgccccgcggggagcccgaa
ccgctgatgccctttggcccctcgtcgcggcagccactcagagggcggcttcttggcagg
tgcagcggcggcagcctgctgagcccctcgatgcggcccggcggcgtcgaccgcggctcc
ctcatgatgggacacccaggcatgccacattatcctcccatgggaatgcaccctatgggt
cagagaccaccaaatatgccgccagttccacacggtatgatgcctcagatgatgcccccc
atgggaggaccgccaatggggcagatgcctggaatgatgcagtcagtaatgcctggaatg
atgatgtctcacatgtctcaagctgctatgcagcctacagttccgccaggggtgaacagt
atggatgcgcaagtaggtgtaacacctcctggaactcagagctctgttttgtttcgccct
cagacaacacatcctgtagtttgcgcagcccagcaaaccgccacaaccaacagttctgtt
aatgaagagcactctaaacagaaatctacatggacagaacacaaatcacctgatggaaga
acatattactataatactgaaacaaagcagtctacctgggagaagccagatgatctcaaa
acacccgctgagcaattgttgtctaaatgtccctggaaagagtataaatctgattctgga
aagccctactattataattcccaaacaaaggaatcacgctgggcaaaacccaaagagctt
gaggatcttgaagcaatgattaaagctgaagagaacagcacaaagcccgaagaatcaact
ccaacgccatctgcttcagctgctgcagcagaagcagcaaacacaaccaccacagccaca
accgctgctgaaactgccacagctgttagtaccaccactgctacttctgcagcaacagca
gcccctgaagcagaaagtgctgcagcttcttctgtggtagaaaatgagagtactggcaca
gctgcagctgaggaacagggacaagcaacttctgcacctgctgtgcaggaacagagtgca
gaaactgcagctaacgcagcagacgactcttccaagcaggaggcctcagcagatgctgct
tcaaagaaggaggacgacgatgcccaaccagttaaaaaaacctatacatggaatacaaag
gaagaagcaaagcaagcgtttaaagaactgttaaaagaaaagcgagtaccatccaatgcc
tcttgggagcaagctatgaaaatgatcattaatgatcccagatacagtgctttggcaaaa
ttaagtgaaaaaaagcaagcctttaatgcttacaaagttcaaacagaaaaagaagagaaa
gaagaagcaagatcaaaatacaaagaagctaaagaatccttccagcgttttcttgaaaac
catgaaaagatgacatccacaacaagatacaaaaaagctgaacaaatgtttggggagatg
gaagtctggaatgcgatatctgagcgtgatcgtcttgaaatttatgaagatgtcttgttt
tttctctctaagaaagagaaggaacaagccaaacagttaagaaagaggaattgggaagct
ttgaagaacatactagataacatggctaatgtcacttactgtactacttggtcagaggct
cagcagtatctgatggataatcctacatttgcagaagatgaggaacttcagaacatggat
aaggaggatgcactgatctgttttgaggaacatatcagggcattggaaaaggaggaggaa
gaagaaaaacagaaaagtttgcttagagaaagaaggcgacagcgcaaaaatagagaatct
tttcagctatttttagatgaactgcatgagcatggacaattacattccatgtcctcttgg
atggagttgtacccaaccataagctctgacatcagattcacaaatatgcttggtcaacct
gttttttcatcaggatcgacagcacttgatcttttcaagttctatgttgaagacttgaaa
gcacgttaccatgatgaaaagaagataataaaagatatcttaaaggataaaggatttgtg
gttgaagtgaatacttcttttgaagattttgttacggtcatcagttcaactaaaagagct
actactttagatgcaggaaatatcaagctggctttcaacagtctgctagaaaaggcagaa
gcccgtgaaagagagagggaaaaagaagaagctcgcaaaatgaagcggaaagagtctgcc
ttcaagagtatgttgaagcaagctactcctccaattgaattggacgctgtctgggaagat
atcagagatagatttgtgaaggaaccagcatttgaagacatcactctggagtctgaaaga
aaaagaatatttaaagatttcatgcatgtattagagcacgagtgtcagcatcatcattca
aagaacaagaaacattctaaaaagtctaaaaaacatcataggaagcgatcacgttctcgt
tcgggctcagaatctgaggatgatgatagccactcaaagaagaaaaggcagcgttcagaa
tctagatcggtttctgagcgttcttccagtgcagagtcggagagaagttacaagaagtca
aaaaaacacaagaaaaagagcaagaagagacgacataagtctgattcaccagaatcggat
attgaacgagaaaaagacaaaaaagaaagagagagcgagaaggatagagctagacaaaga
tctgaatcaaaacataaatctcctactaaaaaacgacctggaaaagattctgggaactgg
gatacttcaggcagcgaactgagcgaaggggagctggaaaaacagaggaggactcttttg
gaacaactggatgaagatcaatga
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