Aquila chrysaetos chrysaetos (golden eagle): 115343002
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Entry
115343002 CDS
T08023
Symbol
CROCC
Name
(RefSeq) LOW QUALITY PROTEIN: rootletin
KO
K16469
rootletin
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
achc03037
]
115343002 (CROCC)
Cilium and associated proteins [BR:
achc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115343002 (CROCC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
ATG16
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
115343002
NCBI-ProteinID:
XP_040980479
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All DBs
Position
6:complement(8077021..8097926)
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AA seq
1799 aa
AA seq
DB search
MSSLLSLQEENRILQQELSRVEDLLAQSRAERDELAIKYNAISERLEQTLRLETGEREAA
ESRSLAQHNIELRRLLEEEQAAYKRKLQAYQEGQQRQAQLVQKLQAKVLQYKKKCGEVEQ
QLLEKATELEQERLTIQLDAGSSQPEEESSNELENALIRLEEEQQRSSSLVQVNSMLREQ
LEQANVANAALSEDIRKLTADWARARDELEQREVEWRREEESFNTYFSNEHSRLLTLWRQ
VVAFRRHFGEVKAATERDLSELSHEASRTGRAAHAACLHLAANLRLAESQAGAAREKQAM
RLAQLEEQLAARARDADLEKAALGARLAELAAALERLRTEDGEKERAVEALTLQLQNLEA
SRAQEPSPAEVEALRSEVELLRRTLQDVTQAVLADDPEQPLPSPESPPCPPASPRRSLSP
NAAAAAVHAALHRRHLQLQGAREQAEASREEAGSLRQELGDSEKRLGTLEQRLEQLSAEA
GGCRRAQDEALHEVARLRAEAEVLRRERLRAEEALAGEQQRVGALQQERVQLQRRGEGLE
DARDEAARAAEAARQQLERSQQQVEELEAQRAGAQRELLEVREALSRATLEAEVARGEQE
ALAEALGKAQGSCGELAAAQRAAQAEEARLRDALAKTSELAAGLAREKTELSRTLARLEE
ERESGRIRMRELGQELALLRGRLERGRRAGAAERQGLERARRAAEEGCRGLRAELRVLRG
QHLRLCQHLGQAVQEQSAAGEALAQARGEQERLRGELLRLSRAREGLVKEGASLAVQLAA
AQRHGQDRAQEADGLRTEKEGLESSIFQLQQQLAQLDTRNQQLETEGRTLLQAKETLEAE
LGAARLERERELQARQQAVAAAEAAAVTVALQSARDAHRDELDRLQREKEELEAERVRLV
REQEELAAELAATRRQRESEKQQALALQEEERTALAETLGGLQRSLAEATAELEQQRREV
TGHQEKEQSLAAELRSLRVQAEETTVAHERETKALREQATVAAKQRDGALREAEEARAQL
RLVTEARAAGRRELLEAQREARESREGREAQRRQAQEARRALGDEAREKEALRRSNEELR
AALRRAEGERISLKRASEEKEQRLALVEDGRAAADQEVTELRATLRELERARLDARRELQ
ELRRQVKDLDSENSKRSKEVGELQARVALEEQREEESRREAFGLRQKVVESEAGTEAARK
ELQHLQRRLSEAEGEFRQREKDLARSLEEARGNEKKLLADARNLQLKVEAARGEAAELSL
RLSAAEGRAQGLEAELARGEALRRAAETRLGGIQSALRRTMGIGRARAGSPGKGGGTEGS
GSPSSSPDPDAATEPEAVRAALRDFLRELQDAQREREELRVQVSSLGQQLAEAEEERDNA
SARVQQLQKLVAESEEGRRGELSSTQATLLLQEETLRRGERERQALREKVTALERSLHAA
EGERRAAQERMSAVRAGEAELEDAKRRLDAAESRSTRLELQQRVLEGELQRARLALGERQ
AEARATQDRAELLQKQLAESEQRASTLQLAVERLSTALAESGSKDDAPSATALADGTVVH
ERLLQLQSALAAGELDRRALQEGLEVARRALAEAREEKGALREQLRELREKQEALQRSKE
ELEVQVRQQQEALRQRQEERGGLQERVGSLQRALTRTQGEKREAERVALRLEKDKSALKK
TLDKVEREKLQTQEDSLRLSAEKGRLDRSLGTAERELAEAQQRIRLLQAQVSALEHPSPP
SPGPSPELQRELDRLRIAQLQAQRALEARERVHRHRVRGLEEQIALLKGQELHRHPTSI
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctgctgtccctccaggaggagaaccgcatcctgcagcaggagctgtcgcgc
gtcgaggacttgttggctcagagccgggccgagcgcgatgagttggccatcaagtacaac
gccatcagcgagcgtctggagcaaaccctacggctggagacgggcgagcgggaagcggcg
gagagccggagcttggcgcagcacaacatcgagctgcggcgactattggaggaggaacaa
gccgcctacaagcgcaagctgcaggcataccaggagggccagcagcggcaagcccagctg
gtgcagaagctccaagccaaggtgttgcagtataagaagaaatgcggcgaagtggagcag
cagctgctggagaaggcgacggagctggagcaggagaggctgacgatccaactggatgcg
ggtagctcgcagccggaggaggagagcagcaatgagttggagaatgccctgatccggctg
gaagaggagcagcagaggagcagcagcctggtgcaggtgaactcgatgctgcgggagcag
ctggaacaagccaatgtggccaacgcggcgctgagcgaggacatccgcaagctgacggcc
gactgggcgcgggcgcgggatgagctggagcagcgggaggtggagtggaggcgcgaagag
gagtccttcaacacctacttcagcaacgagcacagccggctcctgaccctctggaggcag
gtggtggccttcagacgtcactttggggaggtgaaagccgccactgaaagggatctctcg
gagctgagccacgaggcgtcgcggacgggcagggctgcccacgccgcctgccttcacctg
gctgccaacctgcggctggccgagagccaggcgggtgccgcgcgggagaagcaggcgatg
cggctggcgcagctggaggagcagctggcggcacgggcgcgggacgccgacttggagaaa
gccgccctcggagccaggctggcggagctggcggcggccctggagcgtctgcggactgag
gatggggagaaggaacgggcggtggaggcgctgaccctgcagctgcaaaacctggaggcc
tcgcgtgcccaggagccgtcgccggcagaggtggaggctttgcgctcggaggtggagctg
ctccgtcggacgctgcaggatgtcacccaggcggtgctagcagacgaccccgagcagccc
ctgccatccccagagtcgccgccgtgtccccccgcgtcccctcgccgcagcctctcgccc
aacgccgccgccgctgccgtgcacgccgccctgcaccgccgccacctccagctgcagggt
gcccgggagcaggcggaggccagccgggaggaggccgggagcctgcggcaggagctgggg
gacagcgagaagcggttggggactctggagcagcggctggagcagctcagcgccgaggcc
gggggctgtcggcgggcgcaggatgaggccctgcacgaggtggcccgcctgcgcgccgag
gccgaggtcctgcgcagggagcggctgcgggcggaggaggcgctggcgggggagcagcag
cgggtgggtgccctgcagcaggagcgggtgcagctgcagcgccggggcgaggggctggag
gacgcccgggacgaggccgcccgtgccgccgaggccgcccgccagcagctggagcgcagc
cagcagcaggtggaggagctggaggcgcagcgggcaggggcgcagcgggagctgctggag
gtgcgggaagcgctgagccgggcgacgctggaggccgaggtggcgcggggcgagcaggag
gcgctggccgaggcgctgggcaaggcgcaggggagctgcggggagctggcagcggcgcag
cgggcggcgcaggcagaggaggctcggctacgggacgccctggccaagacgagcgagttg
gcggccgggctggcacgggagaagacggagctgagccggaccctggcccggttggaagag
gagcgggagagcggccggatccggatgcgggagctggggcaggagctggcgctgctgcgg
gggcggctggaacgggggcgaagggccggggcggccgagcggcagggactggaacgggcg
cgcagggcggccgaggagggctgccgggggctgcgggcagagctgcgggtgctgcggggc
cagcacctgcgcctgtgccagcacctggggcaggcggtgcaggagcagagtgcggcgggc
gaagcgctggcgcaggcgcggggggagcaggagcggctgcggggcgagctgctgcggctc
agccgggcccgcgaggggctggtcaaggagggggccagcctggccgtccagctcgccgcc
gcccagcgccacggccaggatcgggcccaggaggcggatgggctcaggacggagaaggag
gggctggagagcagcatcttccagctgcagcagcagctggcccagctcgacacccgcaac
cagcagctggagaccgagggccggaccctgctccaggccaaggagacgctggaggcggag
ctgggtgccgcacggctggagcgggagcgggagctgcaggcccggcagcaggcggtggca
gcggccgaggcggcggcggtgacggtggccctgcagagcgcccgcgatgcgcaccgcgat
gagctcgaccgcctccagcgtgagaaggaggagctggaggccgagcgggtccggctggtg
cgggagcaggaggagctggcggctgagctggcggcaacacggcggcagcgcgagagcgag
aagcagcaggcgctggcgctgcaggaggaggagcggacggcgctggcggagacgctgggg
gggctgcagcggagcctggccgaggccacggctgagctcgagcagcagcggcgagaggtc
accggccaccaggagaaggagcagagcctggcagcggagctgcgcagcctgcgggtgcag
gcagaggagacgacagtggcccacgagcgggagacgaaggctcttcgtgagcaagcgacg
gtggcggccaagcagcgggatggtgccctgcgggaggcggaggaggcgcgggcacaactg
cggctggtgacggaggcgcgggcggcggggcggcgggagctgctggaggcgcagcgggaa
gcccgggagagccgggagggtcgggaagcgcagcggaggcaggcgcaggaggcacgtcgg
gctttgggagacgaggcgagggagaaggaggccctgcggcgctccaacgaggagctgcgg
gcagcactgcgacgcgccgagggcgagcgcatcagcctgaagcgtgccagcgaggagaag
gagcagcggctggcgctggtggaggacgggcgggcagcagcagaccaggaggtgacggag
ctgcgggcaaccctgcgggagctggagcgtgcccgcctcgacgcccgccgtgagctgcag
gagctgcgccggcaggtgaaggacctggacagcgagaacagcaagaggagcaaggaggtg
ggcgagctgcaggcgcgcgtggccctggaggaacagcgggaggaggagagccgccgcgaa
gccttcggcctcaggcagaaggtggtggagagcgaggccggcacagaggctgccaggaaa
gagctccagcacctgcagcggcgactgtcggaggcggagggtgaatttcggcagcgggag
aaggacctggcccgtagcttggaggaggctcgcggcaacgagaagaagctgctggccgat
gcccgcaacctgcagctgaaggtggaggcggcacggggcgaagcggccgagctgagccta
cgcctgagcgcagctgagggtcgggcgcaggggctggaagccgagctggcccgtggcgag
gcgctgcgccgggctgccgaaacccgcttgggaggcatccagtccgccctacgccgtacc
atgggcatcggccgggcacgggctggctccccgggcaagggtgggggaacagaggggtca
gggagtcccagctcatccccggaccccgacgcagcgactgagcccgaggcggtgcgggca
gccctgcgggatttcctacgcgagctgcaggacgcgcagcgggagcgggaggagctgcgg
gtgcaggtgagcagcctgggccagcagctggcggaggcggaggaggagcgggacaatgcc
agcgcccgggtgcagcagctccagaaactggtggctgagagcgaggaagggcgtcgcggg
gagctgagcagcacccaggccacgttgctgctgcaggaggagacgctgcgacggggcgaa
cgggagcggcaggcactgcgggagaaggtgacggcgctggaacggagcctgcacgctgcc
gagggcgagcgtcgagctgcccaggagaggatgagcgcggtgcgagccggcgaggccgag
ttggaggatgccaagcggcgactggatgcggcagaaagccggagcacccgcctggagctg
cagcagcgggtgctggagggcgagctgcagcgggcacggctggccctgggcgagcggcaa
gcggaggcacgggcgacgcaagaccgcgccgagctgctgcagaaacagctagcggagagc
gagcagcgcgctagcactttgcagctggcggtggaacggttgagcacagcgttggcggag
agcggctcgaaggacgacgcgccgagcgcgacggcgttggccgatggcaccgtggtccat
gagcggctgctgcagctccaaagcgccctggctgccggcgagctcgaccgccgggcgctg
caggaggggctggaggtggcgcggcgggcgctggcggaggcgcgggaggagaagggagcc
ctgcgggagcagctgcgggagctgcgggagaagcaggaggccctgcagcggagcaaggag
gagctggaggtgcaggtccggcagcagcaggaggcactgcggcagcggcaggaggaacgc
ggggggctgcaagagcgggtgggcagcctgcagcgcgccctgacccgcacacagggcgag
aagcgggaggccgagcgcgtcgccctgcgcctcgagaaggacaagagcgccctgaagaag
accctggacaaggtggagcgcgagaagctgcagacgcaggaggactcgctgcggctctcg
gcggagaagggccggctggatcgctcgctgggcacggccgagcgggagctggcagaggcg
cagcaacgcatccggctgttgcaggcgcaggtttcggcgctggagcacccgtctccgccg
agccccgggccctcgccggagctgcagcgggagctggatcgcctgcgcatcgcccagctc
caagcccagcgggcgctggaggctcgcgagcgcgtccaccgccaccgcgtccgcggcctg
gaggagcagatcgcgctcctgaaggggcaggagctccaccgtcaccctaccagcatctag
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